RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 ABCA9Q8IUA7 1624 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 A2MP01023 1474 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 MAGI2Q86UL8 1455 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 NCOA1Q15788 1441 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 UHRF1BP1Q6BDS2 1440 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 KIAA1107Q9UPP5 1409 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 CENPVL3A0A0U1RRI6 287 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 SMCO2A6NFE2 343 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 CHST10O43529 356 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 KLHL41O60662 606 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 CBR3O75828 277 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 CTSLP07711 333 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 ME2P23368 584 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 LOXP28300 417 aaPredicted RBP1.95□□□□□ -2.1
PALB2-203ENST00000565038 TAGLN2P37802 199 aaKnown RBP1.95□□□□□ -2.1
PALB2-203ENST00000565038 NAA10P41227 235 aaPredicted RBP1.95□□□□□ -2.1
PALB2-203ENST00000565038 MEF2BQ02080 365 aaPredicted RBP1.95□□□□□ -2.1
PALB2-203ENST00000565038 QPRTQ15274 297 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 ZNF726P1Q15940 193 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 RNASE13Q5GAN3 156 aaKnown RBP1.95□□□□□ -2.1
PALB2-203ENST00000565038 TCEAL5Q5H9L2 206 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 GPR107Q5VW38 600 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 TMEM107Q6UX40 140 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 LRP11Q86VZ4 500 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 CNPY4Q8N129 248 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 COX18Q8N8Q8 333 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 ST20-AS1Q8NBB2 130 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 TTLQ8NG68 377 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 OR9K2Q8NGE7 335 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 TCEAL3Q969E4 200 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 C8orf17Q9NRJ1 99 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 SLC2A8Q9NY64 477 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 DHCR7Q9UBM7 475 aaKnown RBP1.95□□□□□ -2.1
PALB2-203ENST00000565038 LTBP4Q8N2S1 1624 aa1.95□□□□□ -2.1
PALB2-203ENST00000565038 BCORL1Q5H9F3 1711 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 PCF11O94913 1555 aaKnown RBP1.94□□□□□ -2.1
PALB2-203ENST00000565038 ABCC5O15440 1437 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 CEP162Q5TB80 1403 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 SRCAPQ6ZRS2 3230 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 RIMS1Q86UR5 1692 aaKnown RBP1.94□□□□□ -2.1
PALB2-203ENST00000565038 CFAP43Q8NDM7 1665 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 VGLL3A8MV65 326 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 NVLO15381 856 aaKnown RBP1.94□□□□□ -2.1
PALB2-203ENST00000565038 IGLV3-25P01717 112 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 SLC2A3P11169 496 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 ERGP11308 486 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 TGM3Q08188 693 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 IL15RAQ13261 267 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 MAJINQ3KP22 176 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 SPIN3Q5JUX0 258 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 PPM1LQ5SGD2 360 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 MBOAT1Q6ZNC8 495 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 TMEM150AQ86TG1 271 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 OR1P1Q8NH06 330 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 DNAJC1Q96KC8 554 aaKnown RBP1.94□□□□□ -2.1
PALB2-203ENST00000565038 RBBP8Q99708 897 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 GGTLC1Q9BX51 225 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 OR51M1Q9H341 326 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 CBY1Q9Y3M2 126 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 TMEM94Q12767 1356 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 NCOA2Q15596 1464 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 SHANK2Q9UPX8 1470 aa1.94□□□□□ -2.1
PALB2-203ENST00000565038 NPHP4O75161 1426 aaPredicted RBP1.93□□□□□ -2.1
PALB2-203ENST00000565038 STRCQ7RTU9 1775 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 CAMSAP1Q5T5Y3 1602 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 H7C417 338 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 AIM2O14862 343 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 FKBP6O75344 327 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 SLC22A5O76082 557 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 H6PDO95479 791 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 CD37P11049 281 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 COL8A2P25067 703 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 FOXN2P32314 431 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 GDI2P50395 445 aaKnown RBP1.93□□□□□ -2.1
PALB2-203ENST00000565038 KRTAP12-3P60328 96 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 SOHLH1Q5JUK2 328 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 NKAIN4Q8IVV8 208 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 NPWQ8N729 165 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 NECAB1Q8N987 351 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 KCNG3Q8TAE7 436 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 FBXO32Q969P5 355 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 EEF1AKMT3Q96AZ1 226 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 LHX5Q9H2C1 402 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 DHX35Q9H5Z1 703 aaKnown RBP1.93□□□□□ -2.1
PALB2-203ENST00000565038 METTL7AQ9H8H3 244 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 UXTQ9UBK9 157 aaPredicted RBP1.93□□□□□ -2.1
PALB2-203ENST00000565038 MTFP1Q9UDX5 166 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 USP47Q96K76 1375 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 ZNF518AQ6AHZ1 1483 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 SAMD9LQ8IVG5 1584 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 DIP2CQ9Y2E4 1556 aa1.93□□□□□ -2.1
PALB2-203ENST00000565038 RTEL1-TNFRSF6BF6WH68 1400 aa1.92□□□□□ -2.1
PALB2-203ENST00000565038 DOCK8Q8NF50 2099 aa1.92□□□□□ -2.1
PALB2-203ENST00000565038 EFCAB5A4FU69 1503 aa1.92□□□□□ -2.1
PALB2-203ENST00000565038 AGLP35573 1532 aa1.92□□□□□ -2.1
PALB2-203ENST00000565038 LRRC7Q96NW7 1537 aa1.92□□□□□ -2.1
PALB2-203ENST00000565038 SYCP2Q9BX26 1530 aa1.92□□□□□ -2.1
PALB2-203ENST00000565038 RICTORQ6R327 1708 aa1.92□□□□□ -2.1
PALB2-203ENST00000565038 TRAV6A0A075B6T7 132 aa1.92□□□□□ -2.1
PALB2-203ENST00000565038 IGKV1-8A0A0C4DH67 115 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms