RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 ATF6BQ99941 703 aa9.67□□□□□ -0.86
SF3B3-205ENST00000564899 HDHD2Q9H0R4 259 aa9.67□□□□□ -0.86
SF3B3-205ENST00000564899 DDX28Q9NUL7 540 aaKnown RBP9.67□□□□□ -0.86
SF3B3-205ENST00000564899 ZNF224Q9NZL3 707 aa9.67□□□□□ -0.86
SF3B3-205ENST00000564899 FBXL3Q9UKT7 428 aa9.67□□□□□ -0.86
SF3B3-205ENST00000564899 AKAP6Q13023 2319 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 ZNF503-AS2A6NEH8 195 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 HOXB1P14653 301 aaPredicted RBP9.66□□□□□ -0.86
SF3B3-205ENST00000564899 CD36P16671 472 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 CPEP16870 476 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 CELP19835 753 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 IL32P24001 234 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 ARR3P36575 388 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 TGFBR2P37173 567 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 HTR5AP47898 357 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 TGM4P49221 684 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 RGS6P49758 472 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 PSMA6P60900 246 aaKnown RBP9.66□□□□□ -0.86
SF3B3-205ENST00000564899 ECH1Q13011 328 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 TPBGQ13641 420 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 CDK5R1Q15078 307 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 SSX1Q16384 188 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 ZNF829Q3KNS6 432 aaPredicted RBP9.66□□□□□ -0.86
SF3B3-205ENST00000564899 CCDC58Q4VC31 144 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 PABPC1L2AQ5JQF8 200 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 ZNF544Q6NX49 715 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 RPL22L1Q6P5R6 122 aaKnown RBP9.66□□□□□ -0.86
SF3B3-205ENST00000564899 ARL9Q6T311 187 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 RHOUQ7L0Q8 258 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 CDH24Q86UP0 819 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 CLVS1Q8IUQ0 354 aaPredicted RBP9.66□□□□□ -0.86
SF3B3-205ENST00000564899 C17orf78Q8N4C9 275 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 OR1F12Q8NHA8 337 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 YIPF6Q96EC8 236 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 COQ7Q99807 217 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 WNT5BQ9H1J7 359 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 NIPAL2Q9H841 368 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 NOX3Q9HBY0 568 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 SLC17A5Q9NRA2 495 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 ST6GALNAC2Q9UJ37 374 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 GTF2A1LQ9UNN4 478 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 SIRT4Q9Y6E7 314 aaPredicted RBP9.66□□□□□ -0.86
SF3B3-205ENST00000564899 R4GMQ9 66 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 ARHGAP21Q5T5U3 1957 aa9.66□□□□□ -0.86
SF3B3-205ENST00000564899 PRRC2AP48634 2157 aaKnown RBP9.65□□□□□ -0.86
SF3B3-205ENST00000564899 FREM1Q5H8C1 2179 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 FLNAP21333 2647 aaKnown RBP9.65□□□□□ -0.86
SF3B3-205ENST00000564899 ARPC4-TTLL3A0A0A6YYG9 625 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 SMIM31A0A1B0GVY4 71 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 A0A1W2PR80 420 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 OR6C6A6NF89 314 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 CCDC160A6NGH7 325 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 LOC110117498-PIK3R3F6TDL0 507 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 OGG1O15527 345 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 SYNGR3O43761 229 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 PSMB1P20618 241 aaKnown RBP9.65□□□□□ -0.86
SF3B3-205ENST00000564899 CHRNB4P30926 498 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 DCTDP32321 178 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 CX3CR1P49238 355 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 PRKXP51817 358 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 NANOS3P60323 173 aaKnown RBP9.65□□□□□ -0.86
SF3B3-205ENST00000564899 RAB1AP62820 205 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 GALK2Q01415 458 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 PLP2Q04941 152 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 SLC3A1Q07837 685 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 MFGE8Q08431 387 aaPredicted RBP9.65□□□□□ -0.86
SF3B3-205ENST00000564899 ALKBH1Q13686 389 aaKnown RBP9.65□□□□□ -0.86
SF3B3-205ENST00000564899 GSG1Q2KHT4 349 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 GPR107Q5VW38 600 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 DMKNQ6E0U4 476 aaPredicted RBP9.65□□□□□ -0.86
SF3B3-205ENST00000564899 STAC2Q6ZMT1 411 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 MDP1Q86V88 176 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 P2RY8Q86VZ1 359 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 PHC2Q8IXK0 858 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 ALDH16A1Q8IZ83 802 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 ZNF283Q8N7M2 679 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 OR2G2Q8NGZ5 317 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 ASB5Q8WWX0 329 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 HSD17B8Q92506 261 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 SPTSSAQ969W0 71 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 RNF166Q96A37 237 aaPredicted RBP9.65□□□□□ -0.86
SF3B3-205ENST00000564899 SMIM19Q96E16 107 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 BOD1Q96IK1 185 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 C4orf45Q96LM5 186 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 KCNJ15Q99712 375 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 FUNDC2Q9BWH2 189 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 HDHD5Q9BXW7 423 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 OBP2BQ9NPH6 170 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 NDUFB11Q9NX14 153 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 ELOVL5Q9NYP7 299 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 COQ3Q9NZJ6 369 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 JKAMPQ9P055 326 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 ATPIF1Q9UII2 106 aa9.65□□□□□ -0.86
SF3B3-205ENST00000564899 TRBV2A0A0J9YWF9 115 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 IQCMA0A1B0GVH7 501 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 TMEM269A0A1B0GVZ9 245 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 A6NHS1 94 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 OR5H1A6NKK0 313 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 FAM90A27PA6NNH2 459 aa9.64□□□□□ -0.87
SF3B3-205ENST00000564899 F5H5K5 113 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms