RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 METTL8Q9H825 291 aaKnown RBP18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 ACKR4Q9NPB9 350 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 LOC107986453A0A1B0GWG9 222 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 SDCBPO00560 298 aaPredicted RBP18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 SFTPBP07988 381 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 ABOP16442 354 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 OR2B8PP59922 312 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 PHYHIPLQ96FC7 376 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 NRIP2Q9BQI9 281 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 GSN-AS1Q9NRJ2 163 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 PCDHGA1Q9Y5H4 931 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 TMEM14AQ9Y6G1 99 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 FOXS1O43638 330 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 ASAH2BP0C7U1 165 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 C5AR1P21730 350 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 RIDAP52758 137 aaKnown RBP18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 RUNX3Q13761 415 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 MST1LQ2TV78 715 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 RPL7L1Q6DKI1 246 aaKnown RBP18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 OR52N4Q8NGI2 321 aa18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 PRMT8Q9NR22 394 aaPredicted RBP18.36■□□□□ 0.53
MAP1LC3B-206ENST00000564844 PHF3Q92576 2039 aaKnown RBP18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 NPIPB9F8W1W9 429 aa18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 HLA-DOBP13765 273 aa18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 LPAR6P43657 344 aa18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 EGR3Q06889 387 aa18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 SLC18B1Q6NT16 456 aa18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 PAQR4Q8N4S7 273 aaPredicted RBP18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 PRRT1Q99946 306 aa18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 G6PC3Q9BUM1 346 aa18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 CHRDQ9H2X0 955 aa18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 H0YIG0 161 aa18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 NDUFS6O75380 124 aaKnown RBP18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 CD74P04233 296 aa18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 LURAP1LQ8IV03 231 aa18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 ZNF101Q8IZC7 436 aa18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 SEMA6DQ8NFY4 1073 aa18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 SECTM1Q8WVN6 248 aa18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 BCL2L14Q9BZR8 327 aa18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 BANF2Q9H503 90 aa18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 PRTFDC1Q9NRG1 225 aa18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 CYTL1Q9NRR1 136 aa18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 GDF2Q9UK05 429 aaPredicted RBP18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 SLC5A6Q9Y289 635 aa18.35■□□□□ 0.53
MAP1LC3B-206ENST00000564844 A0A1W2PP11 408 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 C2orf72A6NCS6 295 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 PRR19A6NJB7 356 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 INSM1Q01101 510 aaPredicted RBP18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 PJVKQ0ZLH3 352 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 FAM166AQ6J272 317 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 LCN10Q6JVE6 187 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 ZNF615Q8N8J6 731 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 BAHD1Q8TBE0 780 aaPredicted RBP18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 LMF2Q9BU23 707 aaKnown RBP18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 FOXQ1Q9C009 403 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 RAB27BO00194 218 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 SCDO00767 359 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 CXCR1P25024 350 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 RIPPLY1Q0D2K3 151 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 FABP9Q0Z7S8 132 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 FAM76BQ5HYJ3 339 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 CDCP2Q5VXM1 449 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 PPP1R3BQ86XI6 285 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 OR13C9Q8NGT0 318 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 NXF5Q9H1B4 397 aaKnown RBP18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 POLE3Q9NRF9 147 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 TTLL8A6PVC2 850 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 RNASEK-C17orf49H0YIS7 233 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 FGF16O43320 207 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 FAM157CP0CG43 387 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 RAB38P57729 211 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 EIF2S3LQ2VIR3 472 aaKnown RBP18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 MYO7BQ6PIF6 2116 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 BADQ92934 168 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 MMABQ96EY8 250 aaPredicted RBP18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 EDEM2Q9BV94 578 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 GHRLQ9UBU3 117 aa18.34■□□□□ 0.53
MAP1LC3B-206ENST00000564844 hCG_1809904A0A1W2PP81 198 aa18.33■□□□□ 0.53
MAP1LC3B-206ENST00000564844 A0A1W2PR64 198 aa18.33■□□□□ 0.53
MAP1LC3B-206ENST00000564844 A0A1W2PRV1 198 aa18.33■□□□□ 0.53
MAP1LC3B-206ENST00000564844 A6NLC8 198 aa18.33■□□□□ 0.53
MAP1LC3B-206ENST00000564844 COLCA2A8K830 154 aa18.33■□□□□ 0.53
MAP1LC3B-206ENST00000564844 SLC2A1P11166 492 aa18.33■□□□□ 0.53
MAP1LC3B-206ENST00000564844 NQO2P16083 231 aa18.33■□□□□ 0.53
MAP1LC3B-206ENST00000564844 MNX1P50219 401 aaPredicted RBP18.33■□□□□ 0.53
MAP1LC3B-206ENST00000564844 RAB5BP61020 215 aa18.33■□□□□ 0.53
MAP1LC3B-206ENST00000564844 RAB32Q13637 225 aa18.33■□□□□ 0.53
MAP1LC3B-206ENST00000564844 MICBQ29980 383 aa18.33■□□□□ 0.53
MAP1LC3B-206ENST00000564844 COMMD2Q86X83 199 aa18.33■□□□□ 0.53
MAP1LC3B-206ENST00000564844 RNF128Q8TEB7 428 aa18.33■□□□□ 0.53
MAP1LC3B-206ENST00000564844 IP6K3Q96PC2 410 aa18.33■□□□□ 0.53
MAP1LC3B-206ENST00000564844 SULT4A1Q9BR01 284 aa18.33■□□□□ 0.53
MAP1LC3B-206ENST00000564844 RCC2Q9P258 522 aaKnown RBP18.33■□□□□ 0.53
MAP1LC3B-206ENST00000564844 MIOXQ9UGB7 285 aa18.33■□□□□ 0.53
MAP1LC3B-206ENST00000564844 A0A1B0GTQ1 180 aa18.33■□□□□ 0.52
MAP1LC3B-206ENST00000564844 TMEM269A0A1B0GVZ9 245 aa18.33■□□□□ 0.52
MAP1LC3B-206ENST00000564844 CD79AP11912 226 aa18.33■□□□□ 0.52
MAP1LC3B-206ENST00000564844 IL11P20809 199 aa18.33■□□□□ 0.52
MAP1LC3B-206ENST00000564844 PPICP45877 212 aa18.33■□□□□ 0.52
MAP1LC3B-206ENST00000564844 NR0B1P51843 470 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms