RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, human

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB40C-208	ENST00000564703	TAAR3P	Q9P1P4	343 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	CCDC168	Q8NDH2	2452 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	NBPF19	A0A087WUL8	3843 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	PLSCR5	A0PG75	271 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703		H3BSA7	217 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703		M0R135	149 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703		M0R233	179 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	CLPTM1	O96005	669 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	ADRA2A	P08913	450 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	MRPL3	P09001	348 aa	Known RBP	13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	ACSM4	P0C7M7	580 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	PEX2	P28328	305 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	PPOX	P50336	477 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	PRKX	P51817	358 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	SNRPG	P62308	76 aa	Known RBP	13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	POU4F2	Q12837	409 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	TMED1	Q13445	227 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	RSPO1	Q2MKA7	263 aa	Predicted RBP	13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	MBNL2	Q5VZF2	373 aa	Known RBP	13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	TTC23	Q5W5X9	447 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	PRSS57	Q6UWY2	283 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	DRAM2	Q6UX65	266 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	RFPL4B	Q6ZWI9	263 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	KRT77	Q7Z794	578 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	LRP11	Q86VZ4	500 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	DHRSX	Q8N5I4	330 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	OR10S1	Q8NGN2	331 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	KLF14	Q8TD94	323 aa	Predicted RBP	13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	ST7L	Q8TDW4	575 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	UBE2F	Q969M7	185 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	ZNF799	Q96GE5	643 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	ZNF582	Q96NG8	517 aa	Predicted RBP	13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	MNT	Q99583	582 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	CXXC4	Q9H2H0	198 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	CLN6	Q9NWW5	311 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	HAO2	Q9NYQ3	351 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	N6AMT1	Q9Y5N5	214 aa		13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	PRRC2A	P48634	2157 aa	Known RBP	13.72	□□□□□ -0.21
RAB40C-208	ENST00000564703	CCDC182	A6NF36	153 aa		13.71	□□□□□ -0.21
RAB40C-208	ENST00000564703	PHYH	O14832	338 aa		13.71	□□□□□ -0.21
RAB40C-208	ENST00000564703	CASQ2	O14958	399 aa	Predicted RBP	13.71	□□□□□ -0.21
RAB40C-208	ENST00000564703	SLC16A6	O15403	523 aa		13.71	□□□□□ -0.21
RAB40C-208	ENST00000564703	IGHV3-13	P01766	116 aa		13.71	□□□□□ -0.21
RAB40C-208	ENST00000564703	ALOX5AP	P20292	161 aa		13.71	□□□□□ -0.21
RAB40C-208	ENST00000564703	HTR1F	P30939	366 aa		13.71	□□□□□ -0.21
RAB40C-208	ENST00000564703	LIPA	P38571	399 aa		13.71	□□□□□ -0.21
RAB40C-208	ENST00000564703	EFNA4	P52798	201 aa		13.71	□□□□□ -0.21
RAB40C-208	ENST00000564703	HCCS	P53701	268 aa		13.71	□□□□□ -0.21
RAB40C-208	ENST00000564703	OCLN	Q16625	522 aa		13.71	□□□□□ -0.21
RAB40C-208	ENST00000564703	SLC25A30	Q5SVS4	291 aa		13.71	□□□□□ -0.21
RAB40C-208	ENST00000564703	OGFRL1	Q5TC84	451 aa	Predicted RBP	13.71	□□□□□ -0.21
RAB40C-208	ENST00000564703	NAA40	Q86UY6	237 aa		13.71	□□□□□ -0.21
RAB40C-208	ENST00000564703	RNF133	Q8WVZ7	376 aa		13.71	□□□□□ -0.21
RAB40C-208	ENST00000564703	CYGB	Q8WWM9	190 aa		13.71	□□□□□ -0.21
RAB40C-208	ENST00000564703	ASB17	Q8WXJ9	295 aa		13.71	□□□□□ -0.21
RAB40C-208	ENST00000564703	CMBL	Q96DG6	245 aa		13.71	□□□□□ -0.21
RAB40C-208	ENST00000564703	C1QTNF5	Q9BXJ0	243 aa		13.71	□□□□□ -0.21
RAB40C-208	ENST00000564703	MRO	Q9BYG7	248 aa		13.71	□□□□□ -0.21
RAB40C-208	ENST00000564703	RNPEPL1	Q9HAU8	725 aa		13.71	□□□□□ -0.21
RAB40C-208	ENST00000564703	DNAJC27	Q9NZQ0	273 aa		13.71	□□□□□ -0.21
RAB40C-208	ENST00000564703	ARFGEF3	Q5TH69	2177 aa		13.71	□□□□□ -0.22
RAB40C-208	ENST00000564703	IGLV3-9	A0A075B6K5	115 aa		13.7	□□□□□ -0.22
RAB40C-208	ENST00000564703	ZNF670-ZNF695	F2Z2N8	137 aa		13.7	□□□□□ -0.22
RAB40C-208	ENST00000564703	TIMM8A	O60220	97 aa	Predicted RBP	13.7	□□□□□ -0.22
RAB40C-208	ENST00000564703	SSX4	O60224	188 aa		13.7	□□□□□ -0.22
RAB40C-208	ENST00000564703	F12	P00748	615 aa	Predicted RBP	13.7	□□□□□ -0.22
RAB40C-208	ENST00000564703	PSKH1	P11801	424 aa		13.7	□□□□□ -0.22
RAB40C-208	ENST00000564703	ALDH3B1	P43353	468 aa		13.7	□□□□□ -0.22
RAB40C-208	ENST00000564703	GGTLC2	Q14390	218 aa		13.7	□□□□□ -0.22
RAB40C-208	ENST00000564703	MSMP	Q1L6U9	139 aa		13.7	□□□□□ -0.22
RAB40C-208	ENST00000564703	KRTAP27-1	Q3LI81	207 aa		13.7	□□□□□ -0.22
RAB40C-208	ENST00000564703		Q5PR19	223 aa		13.7	□□□□□ -0.22
RAB40C-208	ENST00000564703	SLC35F2	Q8IXU6	374 aa		13.7	□□□□□ -0.22
RAB40C-208	ENST00000564703	OR51G2	Q8NGK0	314 aa		13.7	□□□□□ -0.22
RAB40C-208	ENST00000564703	NEU4	Q8WWR8	484 aa	Predicted RBP	13.7	□□□□□ -0.22
RAB40C-208	ENST00000564703	HAVCR1	Q96D42	359 aa		13.7	□□□□□ -0.22
RAB40C-208	ENST00000564703	VCX3B	Q9H321	246 aa		13.7	□□□□□ -0.22
RAB40C-208	ENST00000564703	NIPAL2	Q9H841	368 aa		13.7	□□□□□ -0.22
RAB40C-208	ENST00000564703	CYSLTR2	Q9NS75	346 aa		13.7	□□□□□ -0.22
RAB40C-208	ENST00000564703	PTTG3P	Q9NZH4	202 aa		13.7	□□□□□ -0.22
RAB40C-208	ENST00000564703	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.7	□□□□□ -0.22
RAB40C-208	ENST00000564703	TEX15	Q9BXT5	2789 aa		13.69	□□□□□ -0.22
RAB40C-208	ENST00000564703	NDUFS7	O75251	213 aa		13.69	□□□□□ -0.22
RAB40C-208	ENST00000564703	ENTPD6	O75354	484 aa		13.69	□□□□□ -0.22
RAB40C-208	ENST00000564703	IGHV4-39	P01824	125 aa		13.69	□□□□□ -0.22
RAB40C-208	ENST00000564703	ANXA2	P07355	339 aa	Known RBP	13.69	□□□□□ -0.22
RAB40C-208	ENST00000564703	SBK2	P0C263	348 aa		13.69	□□□□□ -0.22
RAB40C-208	ENST00000564703	OR2T7	P0C7T2	308 aa		13.69	□□□□□ -0.22
RAB40C-208	ENST00000564703	RAC2	P15153	192 aa		13.69	□□□□□ -0.22
RAB40C-208	ENST00000564703	MPV17	P39210	176 aa		13.69	□□□□□ -0.22
RAB40C-208	ENST00000564703	CX3CR1	P49238	355 aa		13.69	□□□□□ -0.22
RAB40C-208	ENST00000564703	IL5RA	Q01344	420 aa		13.69	□□□□□ -0.22
RAB40C-208	ENST00000564703	MAD2L1BP	Q15013	274 aa	Predicted RBP	13.69	□□□□□ -0.22
RAB40C-208	ENST00000564703	ALKBH6	Q3KRA9	238 aa		13.69	□□□□□ -0.22
RAB40C-208	ENST00000564703	ZMAT1	Q5H9K5	638 aa		13.69	□□□□□ -0.22
RAB40C-208	ENST00000564703	DEGS2	Q6QHC5	323 aa		13.69	□□□□□ -0.22
RAB40C-208	ENST00000564703	COLCA1	Q6ZS62	124 aa		13.69	□□□□□ -0.22
RAB40C-208	ENST00000564703	SETD9	Q8NE22	299 aa		13.69	□□□□□ -0.22
RAB40C-208	ENST00000564703	OR2T27	Q8NH04	317 aa		13.69	□□□□□ -0.22

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