RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ZMYND11Q15326 602 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 TUSC1Q2TAM9 212 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 ESCO2Q56NI9 601 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 OR2T2Q6IF00 324 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 RPL13AP3Q6NVV1 102 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 LEG1Q6P5S2 330 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 LRRN1Q6UXK5 716 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 CPLX4Q7Z7G2 160 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 PGAM4Q8N0Y7 254 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 C3orf56Q8N813 242 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 DEFB108BQ8NET1 73 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 SLC26A10Q8NG04 563 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 OR2AJ1Q8NGZ0 328 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 FANK1Q8TC84 345 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 GNPDA2Q8TDQ7 276 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 SLC7A6Q92536 515 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 DVL3Q92997 716 aaPredicted RBP10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 PLEKHA8Q96JA3 519 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 NSMCE2Q96MF7 247 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 IFT27Q9BW83 186 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 SLC22A4Q9H015 551 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 OR52D1Q9H346 318 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 ZMAT3Q9HA38 289 aaKnown RBP10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 DDX28Q9NUL7 540 aaKnown RBP10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 MIOXQ9UGB7 285 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 CD300AQ9UGN4 299 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 NOP16Q9Y3C1 178 aaKnown RBP10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 INSIG2Q9Y5U4 225 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 AUP1Q9Y679 476 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 ARHGAP32A7KAX9 2087 aa10.25□□□□□ -0.77
GTF3C1-204ENST00000564664 TRAPPC2LH3BP13 241 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 OR10H3O60404 316 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 DIRAS1O95057 198 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 PPP1R3DO95685 299 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 FABP3P05413 133 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 HIST1H1CP16403 213 aaKnown RBP10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 GATA4P43694 442 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 GSSP48637 474 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 MNAT1P51948 309 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 SPIBQ01892 262 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 PAX8Q06710 450 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 TSPAN31Q12999 210 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 HLXQ14774 488 aaPredicted RBP10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 RSPO1Q2MKA7 263 aaPredicted RBP10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 ARMCX4Q5H9R4 360 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 SLC18B1Q6NT16 456 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 OR4K13Q8NH42 304 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 SGMS2Q8NHU3 365 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 MEGF10Q96KG7 1140 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 TSSK2Q96PF2 358 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 NMNAT3Q96T66 252 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 PITX2Q99697 317 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 SLC6A7Q99884 636 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 TMEM165Q9HC07 324 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 MMP26Q9NRE1 261 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 DCAF16Q9NXF7 216 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 PTTG3PQ9NZH4 202 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 OR5V1Q9UGF6 321 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 CYB5R1Q9UHQ9 305 aa10.24□□□□□ -0.77
GTF3C1-204ENST00000564664 DCTN6O00399 190 aa10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 ACSM4P0C7M7 580 aa10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 IRF2P14316 349 aa10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 ZNF823P16415 610 aa10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 GGT2P36268 569 aa10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 MMP16P51512 607 aa10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 TPTEP56180 551 aa10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 CORO6Q6QEF8 472 aa10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 C16orf89Q6UX73 402 aa10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 BTNL3Q6UXE8 466 aa10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 DOK3Q7L591 496 aa10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 OR5AS1Q8N127 324 aa10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 RNF148Q8N7C7 305 aa10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 FAM86B1Q8N7N1 296 aa10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 ZDHHC22Q8N966 263 aa10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 PLPP7Q8NBV4 271 aa10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 SPTSSAQ969W0 71 aa10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 CDRT15Q96T59 188 aa10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 ATF6BQ99941 703 aa10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 SSBP3Q9BWW4 388 aaPredicted RBP10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 TRIM15Q9C019 465 aa10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 RPRD1BQ9NQG5 326 aaKnown RBP10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 TAGLN3Q9UI15 199 aa10.23□□□□□ -0.77
GTF3C1-204ENST00000564664 TENM1Q9UKZ4 2725 aa10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 OR6C68A6NDL8 312 aa10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 CEACAM18A8MTB9 384 aa10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 F5H5K5 113 aa10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 RGS9O75916 674 aaPredicted RBP10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 HLA-DQA2P01906 255 aa10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 RRM2P31350 389 aa10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 ERFP50548 548 aa10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 UBA52P62987 128 aaKnown RBP10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 TRAP1Q12931 704 aaKnown RBP10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 FOXL1Q12952 345 aa10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 MEP1BQ16820 701 aa10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 ZNF620Q6ZNG0 422 aa10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 ZNF771Q7L3S4 317 aaPredicted RBP10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 NLRC3Q7RTR2 1065 aa10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 OR52L1Q8NGH7 329 aa10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 OR52E2Q8NGJ4 325 aa10.22□□□□□ -0.77
GTF3C1-204ENST00000564664 OR11L1Q8NGX0 322 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms