RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 FAM122BQ7Z309 247 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 IQCKQ8N0W5 287 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 LGI3Q8N145 548 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 MREGQ8N565 214 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 LINC00304Q8N9R0 145 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 OR5T3Q8NGG3 340 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 OR51L1Q8NGJ5 315 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 OR13C9Q8NGT0 318 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 NDNFQ8TB73 568 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 PYROXD1Q8WU10 500 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 CAPSLQ8WWF8 208 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 CACNG8Q8WXS5 425 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 NAT6Q93015 286 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 CCDC126Q96EE4 140 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 ZBED3Q96IU2 234 aaPredicted RBP2.23□□□□□ -2.05
UBR1-205ENST00000564540 MS4A4EQ96PG1 132 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 XPO6Q96QU8 1125 aaKnown RBP2.23□□□□□ -2.05
UBR1-205ENST00000564540 TMEM59Q9BXS4 323 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 UCK2Q9BZX2 261 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 LINC00597Q9H2U6 94 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 GAL3ST2Q9H3Q3 398 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 MRPL47Q9HD33 250 aaKnown RBP2.23□□□□□ -2.05
UBR1-205ENST00000564540 TREM1Q9NP99 234 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 ADAP2Q9NPF8 381 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 PRSS16Q9NQE7 514 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 EXD2Q9NVH0 621 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 NOSIPQ9Y314 301 aaKnown RBP2.23□□□□□ -2.05
UBR1-205ENST00000564540 N6AMT1Q9Y5N5 214 aa2.23□□□□□ -2.05
UBR1-205ENST00000564540 CDHR2Q9BYE9 1310 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 IGLV3-12A0A075B6K2 115 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 IGHV5-10-1A0A0J9YXX1 117 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 M0R3G1 203 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 NDUFAB1O14561 156 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 PPP1R2P9O14990 202 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 CETN3O15182 167 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 EIF4E2O60573 245 aaKnown RBP2.22□□□□□ -2.05
UBR1-205ENST00000564540 APOA1P02647 267 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 IFNW1P05000 195 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 IGHV1-8P0DP01 117 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 CCL2P13500 99 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 FOLR1P15328 257 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 TCN1P20061 433 aaPredicted RBP2.22□□□□□ -2.05
UBR1-205ENST00000564540 RORAP35398 523 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 CX3CR1P49238 355 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 CCR8P51685 355 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 ATP5J2P56134 94 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 FBXW4P57775 412 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 GPX6P59796 221 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 UBE2MP61081 183 aaKnown RBP2.22□□□□□ -2.05
UBR1-205ENST00000564540 IRX3P78415 501 aaPredicted RBP2.22□□□□□ -2.05
UBR1-205ENST00000564540 LCN2P80188 198 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 RCAN2Q14206 197 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 STK38Q15208 465 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 HSP90AA4PQ58FG1 418 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 C6orf183Q5T699 404 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 CERS6Q6ZMG9 384 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 ZNF493Q6ZR52 646 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 HDDC2Q7Z4H3 204 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 APRG1Q8IVJ8 170 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 SYCE1Q8N0S2 351 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 TMEM104Q8NE00 496 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 MNS1Q8NEH6 495 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 OR56A4Q8NGH8 313 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 CA5BP1Q8WTZ4 195 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 PIH1D2Q8WWB5 315 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 CIDECQ96AQ7 238 aaPredicted RBP2.22□□□□□ -2.05
UBR1-205ENST00000564540 DUS3LQ96G46 650 aaKnown RBP2.22□□□□□ -2.05
UBR1-205ENST00000564540 OPALINQ96PE5 141 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 OR8B4Q96RC9 309 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 TMEM175Q9BSA9 504 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 SPACA1Q9HBV2 294 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 RETNQ9HD89 108 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 DYRK4Q9NR20 520 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 NRBP2Q9NSY0 501 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 SLC17A4Q9Y2C5 497 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 RBMX2Q9Y388 322 aaKnown RBP2.22□□□□□ -2.05
UBR1-205ENST00000564540 KPTNQ9Y664 436 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 TMEM14AQ9Y6G1 99 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.22□□□□□ -2.05
UBR1-205ENST00000564540 MSH6P52701 1360 aa2.22□□□□□ -2.05
UBR1-205ENST00000564540 TMEM120BA0PK00 339 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 CCL21O00585 134 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 CCNB2O95067 398 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 CD160O95971 181 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 IGHV2-5P01817 119 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 HLA-HP01893 362 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 FGGP02679 453 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 FGF1P05230 155 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 C2P06681 752 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 CTRB1P17538 263 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 SLC2A5P22732 501 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 NBL1P41271 181 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 PSMD4P55036 377 aaKnown RBP2.21□□□□□ -2.06
UBR1-205ENST00000564540 RPS15AP62244 130 aaKnown RBP2.21□□□□□ -2.06
UBR1-205ENST00000564540 YWHAEP62258 255 aaKnown RBP2.21□□□□□ -2.06
UBR1-205ENST00000564540 GPR176Q14439 515 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 GPR107Q5VW38 600 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 STUMQ69YW2 141 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 PDPK2PQ6A1A2 396 aa2.21□□□□□ -2.06
UBR1-205ENST00000564540 TRIM40Q6P9F5 258 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms