RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 ERGIC1Q969X5 290 aa12.57□□□□□ -0.4
SNX29-203ENST00000564111 GAL3ST1Q99999 423 aa12.57□□□□□ -0.4
SNX29-203ENST00000564111 BTBD10Q9BSF8 475 aa12.57□□□□□ -0.4
SNX29-203ENST00000564111 DDX28Q9NUL7 540 aaKnown RBP12.57□□□□□ -0.4
SNX29-203ENST00000564111 NPTNQ9Y639 398 aa12.57□□□□□ -0.4
SNX29-203ENST00000564111 FOXH1O75593 365 aa12.57□□□□□ -0.4
SNX29-203ENST00000564111 UBOX5O94941 541 aa12.57□□□□□ -0.4
SNX29-203ENST00000564111 PNPP00491 289 aa12.57□□□□□ -0.4
SNX29-203ENST00000564111 CST1P01037 141 aa12.57□□□□□ -0.4
SNX29-203ENST00000564111 GASTP01350 101 aa12.57□□□□□ -0.4
SNX29-203ENST00000564111 ACSM4P0C7M7 580 aa12.57□□□□□ -0.4
SNX29-203ENST00000564111 CLEC12AQ5QGZ9 265 aa12.57□□□□□ -0.4
SNX29-203ENST00000564111 DRAM2Q6UX65 266 aa12.57□□□□□ -0.4
SNX29-203ENST00000564111 C1orf87Q8N0U7 546 aa12.57□□□□□ -0.4
SNX29-203ENST00000564111 SLC37A3Q8NCC5 494 aa12.57□□□□□ -0.4
SNX29-203ENST00000564111 OR2Z1Q8NG97 314 aa12.57□□□□□ -0.4
SNX29-203ENST00000564111 BCAS4Q8TDM0 211 aa12.57□□□□□ -0.4
SNX29-203ENST00000564111 GTF3AQ92664 365 aaKnown RBP12.57□□□□□ -0.4
SNX29-203ENST00000564111 TSSK2Q96PF2 358 aa12.57□□□□□ -0.4
SNX29-203ENST00000564111 THTPAQ9BU02 230 aa12.57□□□□□ -0.4
SNX29-203ENST00000564111 TOR3AQ9H497 397 aa12.57□□□□□ -0.4
SNX29-203ENST00000564111 FAM53CQ9NYF3 392 aa12.57□□□□□ -0.4
SNX29-203ENST00000564111 TREM2Q9NZC2 230 aa12.57□□□□□ -0.4
SNX29-203ENST00000564111 PPIAL4EA0A075B759 164 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 PPIAL4CA0A0B4J2A2 164 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 A0A0G2JMP0 313 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 A0A0X1KG70 313 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 LRRC30A6NM36 301 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 PPIAL4DF5H284 164 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 ACOT8O14734 319 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 PHF1O43189 567 aaPredicted RBP12.56□□□□□ -0.4
SNX29-203ENST00000564111 PPIAL4FP0DN26 164 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 GGT2P36268 569 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 ENTPD1P49961 510 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 RASSF2P50749 326 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 MVKQ03426 396 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 ZNF181Q2M3W8 571 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 ADGRG5Q8IZF4 528 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 OR4M2Q8NGB6 313 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 CCL17Q92583 94 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 CCDC124Q96CT7 223 aaKnown RBP12.56□□□□□ -0.4
SNX29-203ENST00000564111 CHID1Q9BWS9 393 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 CMC2Q9NRP2 79 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 TMEM106BQ9NUM4 274 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 HIF1ANQ9NWT6 349 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 MALRD1Q5VYJ5 2156 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 ZANQ9Y493 2812 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 A0A1B0GWJ7 208 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 DCTN6O00399 190 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 ATP5HO75947 161 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 HMGN1P05114 100 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 GRB2P62993 217 aaKnown RBP12.56□□□□□ -0.4
SNX29-203ENST00000564111 SLC35F1Q5T1Q4 408 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.56□□□□□ -0.4
SNX29-203ENST00000564111 KLBQ86Z14 1044 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 KLHL36Q8N4N3 616 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 ITFG2Q969R8 447 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 SOX7Q9BT81 388 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 POFUT1Q9H488 388 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 MSL2Q9HCI7 577 aa12.56□□□□□ -0.4
SNX29-203ENST00000564111 M0R135 149 aa12.55□□□□□ -0.4
SNX29-203ENST00000564111 ANXA8P13928 327 aa12.55□□□□□ -0.4
SNX29-203ENST00000564111 RAD23AP54725 363 aa12.55□□□□□ -0.4
SNX29-203ENST00000564111 MS4A2Q01362 244 aa12.55□□□□□ -0.4
SNX29-203ENST00000564111 FLOT2Q14254 428 aa12.55□□□□□ -0.4
SNX29-203ENST00000564111 TAF13Q15543 124 aa12.55□□□□□ -0.4
SNX29-203ENST00000564111 MEP1BQ16820 701 aa12.55□□□□□ -0.4
SNX29-203ENST00000564111 PCK2Q16822 640 aa12.55□□□□□ -0.4
SNX29-203ENST00000564111 AVPI1Q5T686 147 aa12.55□□□□□ -0.4
SNX29-203ENST00000564111 CFAP77Q6ZQR2 320 aa12.55□□□□□ -0.4
SNX29-203ENST00000564111 SHFQ7M4L6 423 aa12.55□□□□□ -0.4
SNX29-203ENST00000564111 MRPL21Q7Z2W9 205 aaKnown RBP12.55□□□□□ -0.4
SNX29-203ENST00000564111 ZNF799Q96GE5 643 aa12.55□□□□□ -0.4
SNX29-203ENST00000564111 DDOQ99489 341 aa12.55□□□□□ -0.4
SNX29-203ENST00000564111 SLC30A2Q9BRI3 323 aa12.55□□□□□ -0.4
SNX29-203ENST00000564111 RBM4Q9BWF3 364 aaKnown RBP12.55□□□□□ -0.4
SNX29-203ENST00000564111 NMNAT2Q9BZQ4 307 aa12.55□□□□□ -0.4
SNX29-203ENST00000564111 TMEM100Q9NV29 134 aa12.55□□□□□ -0.4
SNX29-203ENST00000564111 METRNQ9UJH8 293 aa12.55□□□□□ -0.4
SNX29-203ENST00000564111 PCDHB10Q9UN67 800 aa12.55□□□□□ -0.4
SNX29-203ENST00000564111 PPP1R3CQ9UQK1 317 aa12.55□□□□□ -0.4
SNX29-203ENST00000564111 ISPDA4D126 451 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 FAM157AC9JC47 383 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 ZNF878C9JN71 531 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 TCF21O43680 179 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 DEAF1O75398 565 aaPredicted RBP12.54□□□□□ -0.4
SNX29-203ENST00000564111 DNAJC8O75937 253 aaPredicted RBP12.54□□□□□ -0.4
SNX29-203ENST00000564111 IGHV2-70P01814 119 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 CFL1P23528 166 aaKnown RBP12.54□□□□□ -0.4
SNX29-203ENST00000564111 SLC15A1P46059 708 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 RHOUQ7L0Q8 258 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 SPERTQ8NA61 448 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 ATG16L2Q8NAA4 619 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 OR8D4Q8NGM9 314 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 OR11L1Q8NGX0 322 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 NRBF2Q96F24 287 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 PRRG3Q9BZD7 231 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 FN3KQ9H479 309 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 NARFLQ9H6Q4 476 aa12.54□□□□□ -0.4
SNX29-203ENST00000564111 TRIM36Q9NQ86 728 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms