RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 LYPLA1O75608 230 aaPredicted RBP8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 ARSBP15848 533 aa8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 PRPS1L1P21108 318 aa8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 STOMP27105 288 aa8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 RPL3P39023 403 aaKnown RBP8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 ZNF45Q02386 682 aa8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 SMU1Q2TAY7 513 aa8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 LSM12Q3MHD2 195 aaKnown RBP8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 SLC36A2Q495M3 483 aa8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 SPDYE7PQ495Y7 208 aa8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 ABCA11PQ4W5N1 156 aa8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 NATD1Q8N6N6 113 aa8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 ATG16L2Q8NAA4 619 aa8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 ZNF417Q8TAU3 575 aa8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 ROPN1LQ96C74 230 aa8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 ZNF607Q96SK3 696 aa8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 ZNF587Q96SQ5 575 aaPredicted RBP8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 TUBA4BQ9H853 241 aa8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 TRIM36Q9NQ86 728 aa8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 WDR45Q9Y484 360 aa8.22□□□□□ -1.09
HDGFL3-204ENST00000563790 LOC100509620A0A075B734 347 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 IGHV3-64DA0A0J9YX35 117 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 RNF103-CHMP3A0A140T963 221 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 FAM90A8PA6NJQ4 464 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 TMEM114B3SHH9 223 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 FTCDNL1E5RQL4 147 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 HMGN4O00479 90 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 IMPA2O14732 288 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 TRIM13O60858 407 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 SAP30O75446 220 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 SCAF4O95104 1147 aaKnown RBP8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 SHBGP04278 402 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 PNMTP11086 282 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 GGT2P36268 569 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 DYNLT3P51808 116 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 MVDP53602 400 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 CLDN8P56748 225 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 TCTAP57738 103 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 HOXA4Q00056 320 aaPredicted RBP8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 EPS8Q12929 822 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 TMEM177Q53S58 311 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 CLEC12AQ5QGZ9 265 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 OR4F3Q6IEY1 312 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 TNFAIP8L2Q6P589 184 aaPredicted RBP8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 ACP7Q6ZNF0 438 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 C16orf82Q7Z2V1 217 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 ZDHHC23Q8IYP9 409 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 ARFGAP2Q8N6H7 521 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 PLPP7Q8NBV4 271 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 OR8J2Q8NGG1 315 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 NABP1Q96AH0 204 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 SLC35G5Q96KT7 338 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 PPP3R2Q96LZ3 170 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 ATAD3AQ9NVI7 634 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 ASIC5Q9NY37 505 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 DSCAML1Q8TD84 2053 aa8.21□□□□□ -1.1
HDGFL3-204ENST00000563790 C5orf49A4QMS7 147 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 NPHS1O60500 1241 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 GLCEO94923 617 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 FARS2O95363 451 aaKnown RBP8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 MMP7P09237 267 aaPredicted RBP8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 BMP2P12643 396 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 ATF4P18848 351 aaPredicted RBP8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 GSTM3P21266 225 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 ALDH3A1P30838 453 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 SOAT1P35610 550 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 EGR4Q05215 589 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 CKAP4Q07065 602 aaKnown RBP8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 BNIP2Q12982 314 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 MAB21L1Q13394 359 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 C1DQ13901 141 aaKnown RBP8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 WHAMMP3Q1A5X7 153 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 C16orf62Q7Z3J2 963 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 C5orf24Q7Z6I8 188 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 COMMD1Q8N668 190 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 GOLGA6L1Q8N7Z2 621 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 ANKFN1Q8N957 763 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 OR5D13Q8NGL4 314 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 OR11L1Q8NGX0 322 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 XAGE5Q8WWM1 108 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 FRZBQ92765 325 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 ZNF583Q96ND8 569 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 CDRT15Q96T59 188 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 TMEM38BQ9NVV0 291 aa8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.2□□□□□ -1.1
HDGFL3-204ENST00000563790 TRAV38-1A0A0B4J264 116 aa8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 LOC102725191A0A1B0GVB3 256 aa8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 CFLARO15519 480 aa8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 HSPA12AO43301 675 aa8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 GYPAP02724 150 aa8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 SPARCP09486 303 aa8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 CCT5P48643 541 aa8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 LGALS4P56470 323 aa8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 HSF2Q03933 536 aa8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 CASP8Q14790 479 aa8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 SYPL1Q16563 259 aa8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 PABPC1L2AQ5JQF8 200 aa8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 MRPL2Q5T653 305 aaKnown RBP8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 ZCCHC23Q6ZST2 131 aa8.19□□□□□ -1.1
HDGFL3-204ENST00000563790 LHFPL4Q7Z7J7 247 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms