RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 GINS1Q14691 196 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 NCF4Q15080 339 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 STK38Q15208 465 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 PGGHGQ32M88 737 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 NDUFAF6Q330K2 333 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 NKAIN1Q4KMZ8 207 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 H3F3CQ6NXT2 135 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 CEMP1Q6PRD7 247 aaPredicted RBP2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 ASCL4Q6XD76 172 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 ABHD13Q7L211 337 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 PEX26Q7Z412 305 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 ZNF429Q86V71 674 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 UNC93AQ86WB7 457 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 CSGALNACT2Q8N6G5 542 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 METTL13Q8N6R0 699 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 TRIML2Q8N7C3 387 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 ARIH2OSQ8N7S6 290 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 DUSP18Q8NEJ0 188 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 OR51G1Q8NGK1 321 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 OR4S2Q8NH73 311 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 OR6X1Q8NH79 312 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 MITD1Q8WV92 249 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 CREB3L1Q96BA8 519 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 TMIGD2Q96BF3 282 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 NRBF2Q96F24 287 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 RNF170Q96K19 258 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 RNF145Q96MT1 663 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 ZNF396Q96N95 335 aaPredicted RBP2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 NRTNQ99748 197 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 TDRD3Q9H7E2 651 aaKnown RBP2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 PATZ1Q9HBE1 687 aaKnown RBP2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 WFDC1Q9HC57 220 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 CD84Q9UIB8 345 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 PSG8Q9UQ74 426 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 PIK3R4Q99570 1358 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 MAPK8IP3Q9UPT6 1336 aa2.17□□□□□ -2.06
SHCBP1-202ENST00000563219 TRAV6A0A075B6T7 132 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 SLC22A20A6NK97 555 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 PANO1I0J062 215 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 RRP8O43159 456 aaKnown RBP2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 KDELR3O43731 214 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 ENSAO43768 121 aaKnown RBP2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 SS18L1O75177 396 aaPredicted RBP2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 ETHE1O95571 254 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 PCCAP05165 728 aaPredicted RBP2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 RETP07949 1114 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 HOXC4P09017 264 aaPredicted RBP2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 PGA4P0DJD7 388 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 PGA3P0DJD8 388 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 PGA5P0DJD9 388 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 ERGP11308 486 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 RAB3BP20337 219 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 CLDN18P56856 261 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 TAS2R46P59540 309 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 TNNC1P63316 161 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 HMGCS1Q01581 520 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 RBMY1FQ15415 496 aaKnown RBP2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 FBXO48Q5FWF7 155 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 TFDP3Q5H9I0 405 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 UBE2UQ5VVX9 321 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 AP1ARQ63HQ0 302 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 ARL9Q6T311 187 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 FBXW12Q6X9E4 464 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 CAMK2N1Q7Z7J9 78 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 PRSS58Q8IYP2 241 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 TCAIMQ8N3R3 496 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 WDR31Q8NA23 367 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 OR4D6Q8NGJ1 314 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 LRRC20Q8TCA0 184 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 LKAAEAR1Q8TD35 194 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 ASZ1Q8WWH4 475 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 ELSPBP1Q96BH3 223 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 SGTBQ96EQ0 304 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 SLC35E1Q96K37 410 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 CEP170P1Q96L14 293 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 BMFQ96LC9 184 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 LZTS2Q9BRK4 669 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 UTP23Q9BRU9 249 aaKnown RBP2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 TM6SF2Q9BZW4 377 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 SLIRPQ9GZT3 109 aaKnown RBP2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 CHRNA10Q9GZZ6 450 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 DEFB129Q9H1M3 183 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 DMAP1Q9NPF5 467 aaPredicted RBP2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 ZNF331Q9NQX6 463 aaPredicted RBP2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 FBXO8Q9NRD0 319 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 RPS6KB2Q9UBS0 482 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 PRO0461Q9UI25 63 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 RBMX2Q9Y388 322 aaKnown RBP2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 MEGF6O75095 1541 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 ARHGAP21Q5T5U3 1957 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 ADGRA3Q8IWK6 1321 aa2.16□□□□□ -2.06
SHCBP1-202ENST00000563219 EIF4G1Q04637 1599 aaKnown RBP2.15□□□□□ -2.06
SHCBP1-202ENST00000563219 ZCCHC6Q5VYS8 1495 aaKnown RBP2.15□□□□□ -2.06
SHCBP1-202ENST00000563219 PIKFYVEQ9Y2I7 2098 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 TRBV6-6A0A0A6YYG2 114 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 RAB19A4D1S5 217 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 HACD1B0YJ81 288 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 INS-IGF2F8WCM5 200 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 TMX2-CTNND1H3BSU7 103 aa2.15□□□□□ -2.07
SHCBP1-202ENST00000563219 PSMD11O00231 422 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms