RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 OR5L1Q8NGL2 311 aa16.24■□□□□ 0.19
RAB40C-207ENST00000563109 OR1J1Q8NGS3 322 aa16.24■□□□□ 0.19
RAB40C-207ENST00000563109 NEUROG1Q92886 237 aa16.24■□□□□ 0.19
RAB40C-207ENST00000563109 APOBEC3DQ96AK3 386 aaPredicted RBP16.24■□□□□ 0.19
RAB40C-207ENST00000563109 DOK1Q99704 481 aa16.24■□□□□ 0.19
RAB40C-207ENST00000563109 DHRS9Q9BPW9 319 aa16.24■□□□□ 0.19
RAB40C-207ENST00000563109 ZNF442Q9H7R0 627 aa16.24■□□□□ 0.19
RAB40C-207ENST00000563109 SP140LQ9H930 580 aa16.24■□□□□ 0.19
RAB40C-207ENST00000563109 FGF20Q9NP95 211 aaPredicted RBP16.24■□□□□ 0.19
RAB40C-207ENST00000563109 FAIMQ9NVQ4 179 aa16.24■□□□□ 0.19
RAB40C-207ENST00000563109 TBCCD1Q9NVR7 557 aa16.24■□□□□ 0.19
RAB40C-207ENST00000563109 SLCO1C1Q9NYB5 712 aa16.24■□□□□ 0.19
RAB40C-207ENST00000563109 A0A1W2PPR1 153 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 E7EQL1 145 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 J3QRE1 110 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 PSMD9O00233 223 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 XPNPEP2O43895 674 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 IGHA1P01876 353 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 LCATP04180 440 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 ANXA2P07355 339 aaKnown RBP16.23■□□□□ 0.19
RAB40C-207ENST00000563109 MYL12AP19105 171 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 DCKP27707 260 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 GLRXP35754 106 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 FABP6P51161 128 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 ACTA2P62736 377 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 ACTG2P63267 376 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 ZNF85Q03923 595 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 ZNF829Q3KNS6 432 aaPredicted RBP16.23■□□□□ 0.19
RAB40C-207ENST00000563109 RGS7BPQ6MZT1 257 aaPredicted RBP16.23■□□□□ 0.19
RAB40C-207ENST00000563109 ZNF544Q6NX49 715 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 PLEKHG7Q6ZR37 379 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 AHSA2Q719I0 299 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 ZNF101Q8IZC7 436 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 STX19Q8N4C7 294 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 ZNF540Q8NDQ6 660 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 LILRB1Q8NHL6 650 aaPredicted RBP16.23■□□□□ 0.19
RAB40C-207ENST00000563109 TMEM80Q96HE8 168 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 CHCHD3Q9NX63 227 aaKnown RBP16.23■□□□□ 0.19
RAB40C-207ENST00000563109 TPRKBQ9Y3C4 175 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 CMAHPQ9Y471 501 aa16.23■□□□□ 0.19
RAB40C-207ENST00000563109 METTL15A6NJ78 407 aa16.22■□□□□ 0.19
RAB40C-207ENST00000563109 GPRIN2O60269 458 aa16.22■□□□□ 0.19
RAB40C-207ENST00000563109 TUBG1P23258 451 aa16.22■□□□□ 0.19
RAB40C-207ENST00000563109 THBS4P35443 961 aa16.22■□□□□ 0.19
RAB40C-207ENST00000563109 PSMA6P60900 246 aaKnown RBP16.22■□□□□ 0.19
RAB40C-207ENST00000563109 PPP1CBP62140 327 aa16.22■□□□□ 0.19
RAB40C-207ENST00000563109 MALLQ13021 153 aa16.22■□□□□ 0.19
RAB40C-207ENST00000563109 RSPO1Q2MKA7 263 aaPredicted RBP16.22■□□□□ 0.19
RAB40C-207ENST00000563109 C20orf204Q6ZNR8 217 aa16.22■□□□□ 0.19
RAB40C-207ENST00000563109 SSX6Q7RTT6 188 aa16.22■□□□□ 0.19
RAB40C-207ENST00000563109 FBXL14Q8N1E6 418 aa16.22■□□□□ 0.19
RAB40C-207ENST00000563109 ZNF786Q8N393 782 aa16.22■□□□□ 0.19
RAB40C-207ENST00000563109 YIPF7Q8N8F6 280 aa16.22■□□□□ 0.19
RAB40C-207ENST00000563109 GGHQ92820 318 aa16.22■□□□□ 0.19
RAB40C-207ENST00000563109 ALG8Q9BVK2 526 aa16.22■□□□□ 0.19
RAB40C-207ENST00000563109 JAM3Q9BX67 310 aa16.22■□□□□ 0.19
RAB40C-207ENST00000563109 C1QTNF5Q9BXJ0 243 aa16.22■□□□□ 0.19
RAB40C-207ENST00000563109 TUBG2Q9NRH3 451 aa16.22■□□□□ 0.19
RAB40C-207ENST00000563109 PSORS1C1Q9UIG5 152 aa16.22■□□□□ 0.19
RAB40C-207ENST00000563109 BLOC1S6Q9UL45 172 aa16.22■□□□□ 0.19
RAB40C-207ENST00000563109 DIMT1Q9UNQ2 313 aaKnown RBP16.22■□□□□ 0.19
RAB40C-207ENST00000563109 MYRFQ9Y2G1 1151 aa16.22■□□□□ 0.19
RAB40C-207ENST00000563109 EXOSC1Q9Y3B2 195 aaKnown RBP16.22■□□□□ 0.19
RAB40C-207ENST00000563109 RAI1Q7Z5J4 1906 aaPredicted RBP16.21■□□□□ 0.19
RAB40C-207ENST00000563109 PRR32B1ATL7 298 aa16.21■□□□□ 0.19
RAB40C-207ENST00000563109 H3BSA7 217 aa16.21■□□□□ 0.19
RAB40C-207ENST00000563109 SULT1C4O75897 302 aa16.21■□□□□ 0.19
RAB40C-207ENST00000563109 CCDC159P0C7I6 412 aa16.21■□□□□ 0.19
RAB40C-207ENST00000563109 APOBEC3AP31941 199 aaPredicted RBP16.21■□□□□ 0.19
RAB40C-207ENST00000563109 DCTDP32321 178 aa16.21■□□□□ 0.19
RAB40C-207ENST00000563109 ZNF121P58317 390 aaPredicted RBP16.21■□□□□ 0.19
RAB40C-207ENST00000563109 SELENOVP59797 346 aa16.21■□□□□ 0.19
RAB40C-207ENST00000563109 ST3GAL4Q11206 333 aa16.21■□□□□ 0.19
RAB40C-207ENST00000563109 GALEQ14376 348 aa16.21■□□□□ 0.19
RAB40C-207ENST00000563109 RBM48Q5RL73 367 aaKnown RBP16.21■□□□□ 0.19
RAB40C-207ENST00000563109 ZNF611Q8N823 705 aa16.21■□□□□ 0.19
RAB40C-207ENST00000563109 TMEM171Q8WVE6 324 aa16.21■□□□□ 0.19
RAB40C-207ENST00000563109 MYDGFQ969H8 173 aa16.21■□□□□ 0.19
RAB40C-207ENST00000563109 RHNO1Q9BSD3 238 aa16.21■□□□□ 0.19
RAB40C-207ENST00000563109 PLEKHF2Q9H8W4 249 aa16.21■□□□□ 0.19
RAB40C-207ENST00000563109 ERVK13-1Q9NX77 482 aa16.21■□□□□ 0.19
RAB40C-207ENST00000563109 MRM2Q9UI43 246 aaKnown RBP16.21■□□□□ 0.19
RAB40C-207ENST00000563109 GNG8Q9UK08 70 aa16.21■□□□□ 0.19
RAB40C-207ENST00000563109 N6AMT1Q9Y5N5 214 aa16.21■□□□□ 0.19
RAB40C-207ENST00000563109 CADP27708 2225 aa16.21■□□□□ 0.18
RAB40C-207ENST00000563109 TBX1O43435 398 aa16.2■□□□□ 0.18
RAB40C-207ENST00000563109 NGFP01138 241 aa16.2■□□□□ 0.18
RAB40C-207ENST00000563109 TACSTD2P09758 323 aa16.2■□□□□ 0.18
RAB40C-207ENST00000563109 OR4A8P0C604 315 aa16.2■□□□□ 0.18
RAB40C-207ENST00000563109 SLC2A1P11166 492 aa16.2■□□□□ 0.18
RAB40C-207ENST00000563109 PRF1P14222 555 aa16.2■□□□□ 0.18
RAB40C-207ENST00000563109 GCH1P30793 250 aa16.2■□□□□ 0.18
RAB40C-207ENST00000563109 ZNF718Q3SXZ3 478 aa16.2■□□□□ 0.18
RAB40C-207ENST00000563109 CDONQ4KMG0 1287 aa16.2■□□□□ 0.18
RAB40C-207ENST00000563109 TP53I3Q53FA7 332 aa16.2■□□□□ 0.18
RAB40C-207ENST00000563109 SPATA46Q5T0L3 261 aa16.2■□□□□ 0.18
RAB40C-207ENST00000563109 COLCA1Q6ZS62 124 aa16.2■□□□□ 0.18
RAB40C-207ENST00000563109 KCTD20Q7Z5Y7 419 aa16.2■□□□□ 0.18
RAB40C-207ENST00000563109 LHFPL3Q86UP9 236 aa16.2■□□□□ 0.18
RAB40C-207ENST00000563109 OR52H1Q8NGJ2 320 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms