RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 COL8A2P25067 703 aa13.74□□□□□ -0.21
COMMD4-206ENST00000562610 LIPAP38571 399 aa13.74□□□□□ -0.21
COMMD4-206ENST00000562610 GPR6P46095 362 aaPredicted RBP13.74□□□□□ -0.21
COMMD4-206ENST00000562610 SLC6A9P48067 706 aa13.74□□□□□ -0.21
COMMD4-206ENST00000562610 RIN1Q13671 783 aa13.74□□□□□ -0.21
COMMD4-206ENST00000562610 HLXQ14774 488 aaPredicted RBP13.74□□□□□ -0.21
COMMD4-206ENST00000562610 TRIP10Q15642 601 aa13.74□□□□□ -0.21
COMMD4-206ENST00000562610 C6orf52Q5T4I8 152 aa13.74□□□□□ -0.21
COMMD4-206ENST00000562610 TMEM236Q5W0B7 351 aa13.74□□□□□ -0.21
COMMD4-206ENST00000562610 FAHD1Q6P587 224 aa13.74□□□□□ -0.21
COMMD4-206ENST00000562610 USP51Q70EK9 711 aa13.74□□□□□ -0.21
COMMD4-206ENST00000562610 AMIGO2Q86SJ2 522 aa13.74□□□□□ -0.21
COMMD4-206ENST00000562610 ERI1Q8IV48 349 aaKnown RBP13.74□□□□□ -0.21
COMMD4-206ENST00000562610 OR5AS1Q8N127 324 aa13.74□□□□□ -0.21
COMMD4-206ENST00000562610 OR10S1Q8NGN2 331 aa13.74□□□□□ -0.21
COMMD4-206ENST00000562610 OR6N2Q8NGY6 317 aa13.74□□□□□ -0.21
COMMD4-206ENST00000562610 SPTSSAQ969W0 71 aa13.74□□□□□ -0.21
COMMD4-206ENST00000562610 CMBLQ96DG6 245 aa13.74□□□□□ -0.21
COMMD4-206ENST00000562610 INTS14Q96SY0 518 aa13.74□□□□□ -0.21
COMMD4-206ENST00000562610 COPS4Q9BT78 406 aa13.74□□□□□ -0.21
COMMD4-206ENST00000562610 OR51V1Q9H2C8 321 aa13.74□□□□□ -0.21
COMMD4-206ENST00000562610 NARFLQ9H6Q4 476 aa13.74□□□□□ -0.21
COMMD4-206ENST00000562610 SLC25A19Q9HC21 320 aa13.74□□□□□ -0.21
COMMD4-206ENST00000562610 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.74□□□□□ -0.211e-8■■■■□ 24.7
COMMD4-206ENST00000562610 IGHV1-69-2A0A0G2JMI3 117 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 LRP5LA4QPB2 252 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 M0R135 149 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 ZNF593O00488 134 aaPredicted RBP13.73□□□□□ -0.21
COMMD4-206ENST00000562610 PPIHO43447 177 aaKnown RBP13.73□□□□□ -0.21
COMMD4-206ENST00000562610 TLX2O43763 284 aaPredicted RBP13.73□□□□□ -0.21
COMMD4-206ENST00000562610 GLCEO94923 617 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 LCATP04180 440 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 HMGN1P05114 100 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 HOXB4P17483 251 aaPredicted RBP13.73□□□□□ -0.21
COMMD4-206ENST00000562610 KITLGP21583 273 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 GSTT1P30711 240 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 GZMKP49863 264 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 DAPP51397 102 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 CHN2P52757 468 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 TPTEP56180 551 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 RPS7P62081 194 aaKnown RBP13.73□□□□□ -0.21
COMMD4-206ENST00000562610 CDK5Q00535 292 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 EIF2B1Q14232 305 aaKnown RBP13.73□□□□□ -0.21
COMMD4-206ENST00000562610 TAF13Q15543 124 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 KLHL12Q53G59 568 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 FAM209AQ5JX71 171 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 LINC01590Q5TEZ4 76 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 SPATC1Q76KD6 591 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 ZDHHC13Q8IUH4 622 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 PYDC1Q8WXC3 89 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 SLAMF6Q96DU3 332 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 DUS3LQ96G46 650 aaKnown RBP13.73□□□□□ -0.21
COMMD4-206ENST00000562610 ZNF799Q96GE5 643 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 POM121Q96HA1 1249 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 EGLN1Q9GZT9 426 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 SEMA6AQ9H2E6 1030 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 CENPMQ9NSP4 180 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 ZDHHC8Q9ULC8 765 aa13.73□□□□□ -0.21
COMMD4-206ENST00000562610 NF1P21359 2839 aa13.72□□□□□ -0.21
COMMD4-206ENST00000562610 ZNF878C9JN71 531 aa13.72□□□□□ -0.21
COMMD4-206ENST00000562610 RP2O75695 350 aa13.72□□□□□ -0.21
COMMD4-206ENST00000562610 TACSTD2P09758 323 aa13.72□□□□□ -0.21
COMMD4-206ENST00000562610 RAC2P15153 192 aa13.72□□□□□ -0.21
COMMD4-206ENST00000562610 CRISP1P54107 249 aa13.72□□□□□ -0.21
COMMD4-206ENST00000562610 MRPS11P82912 194 aaKnown RBP13.72□□□□□ -0.21
COMMD4-206ENST00000562610 TNFAIP6P98066 277 aaPredicted RBP13.72□□□□□ -0.21
COMMD4-206ENST00000562610 MALLQ13021 153 aa13.72□□□□□ -0.21
COMMD4-206ENST00000562610 RSPO1Q2MKA7 263 aaPredicted RBP13.72□□□□□ -0.21
COMMD4-206ENST00000562610 KRTAP27-1Q3LI81 207 aa13.72□□□□□ -0.21
COMMD4-206ENST00000562610 CYB5R2Q6BCY4 276 aa13.72□□□□□ -0.21
COMMD4-206ENST00000562610 DPY19L4Q7Z388 723 aa13.72□□□□□ -0.21
COMMD4-206ENST00000562610 CPOQ8IVL8 374 aa13.72□□□□□ -0.21
COMMD4-206ENST00000562610 PARP8Q8N3A8 854 aa13.72□□□□□ -0.21
COMMD4-206ENST00000562610 BHLHE23Q8NDY6 225 aa13.72□□□□□ -0.21
COMMD4-206ENST00000562610 OR2Z1Q8NG97 314 aa13.72□□□□□ -0.21
COMMD4-206ENST00000562610 PTP4A1Q93096 173 aa13.72□□□□□ -0.21
COMMD4-206ENST00000562610 HAVCR1Q96D42 359 aa13.72□□□□□ -0.21
COMMD4-206ENST00000562610 ZMYND19Q96E35 227 aaPredicted RBP13.72□□□□□ -0.21
COMMD4-206ENST00000562610 ELMOD3Q96FG2 381 aa13.72□□□□□ -0.21
COMMD4-206ENST00000562610 DIRC2Q96SL1 478 aa13.72□□□□□ -0.21
COMMD4-206ENST00000562610 C1QTNF5Q9BXJ0 243 aa13.72□□□□□ -0.21
COMMD4-206ENST00000562610 PRRG3Q9BZD7 231 aa13.72□□□□□ -0.21
COMMD4-206ENST00000562610 GABARAPL1Q9H0R8 117 aa13.72□□□□□ -0.21
COMMD4-206ENST00000562610 DDX28Q9NUL7 540 aaKnown RBP13.72□□□□□ -0.21
COMMD4-206ENST00000562610 CACNG2Q9Y698 323 aa13.72□□□□□ -0.21
COMMD4-206ENST00000562610 A8MV72 311 aaPredicted RBP13.71□□□□□ -0.21
COMMD4-206ENST00000562610 PRODHO43272 600 aa13.71□□□□□ -0.21
COMMD4-206ENST00000562610 LILRA1O75019 489 aa13.71□□□□□ -0.21
COMMD4-206ENST00000562610 MITFO75030 526 aaPredicted RBP13.71□□□□□ -0.21
COMMD4-206ENST00000562610 TNFSF4P23510 183 aa13.71□□□□□ -0.21
COMMD4-206ENST00000562610 CRYBB2P43320 205 aa13.71□□□□□ -0.21
COMMD4-206ENST00000562610 PRSS12P56730 875 aa13.71□□□□□ -0.21
COMMD4-206ENST00000562610 KPNB1Q14974 876 aaKnown RBP13.71□□□□□ -0.21
COMMD4-206ENST00000562610 SNAPC1Q16533 368 aa13.71□□□□□ -0.21
COMMD4-206ENST00000562610 PCK2Q16822 640 aa13.71□□□□□ -0.21
COMMD4-206ENST00000562610 HFEQ30201 348 aa13.71□□□□□ -0.21
COMMD4-206ENST00000562610 TEX30Q5JUR7 227 aa13.71□□□□□ -0.21
COMMD4-206ENST00000562610 OR2T2Q6IF00 324 aa13.71□□□□□ -0.21
COMMD4-206ENST00000562610 FBXW12Q6X9E4 464 aa13.71□□□□□ -0.21
COMMD4-206ENST00000562610 CXXC5Q7LFL8 322 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms