RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 MMP24Q9Y5R2 645 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 TRAV8-7A0A075B6U6 113 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 MARCH11A6NNE9 402 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 H0YIZ8 118 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 BRINP1O60477 761 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 ZIC2O95409 532 aaPredicted RBP12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 SEMA4FO95754 770 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 PLGP00747 810 aaPredicted RBP12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 SOD3P08294 240 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 ODF4Q2M2E3 257 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 ARHGAP40Q5TG30 622 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 OR7G2Q8NG99 324 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 S100A13Q99584 98 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 ADAM19Q9H013 955 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 SYT4Q9H2B2 425 aa12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 MRPS2Q9Y399 296 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-203ENST00000562609 WDFY4Q6ZS81 3184 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 ABCA7Q8IZY2 2146 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 FAM221BA6H8Z2 402 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 PPP1R2P9O14990 202 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 OR2C1O95371 312 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 ZNF735P0CB33 412 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 FABP4P15090 132 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 SERPINF1P36955 418 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 DUSP5Q16690 384 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 Q499Y3 187 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 Q6ZRG5 221 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 HIST2H3AQ71DI3 136 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 PNLDC1Q8NA58 520 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 TMEM229BQ8NBD8 167 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 MFSD9Q8NBP5 474 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 OR4K13Q8NH42 304 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 CD300LFQ8TDQ1 290 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 GPR148Q8TDV2 347 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 BPIFA2Q96DR5 249 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 MOGAT1Q96PD6 335 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 SLC6A7Q99884 636 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 TPSD1Q9BZJ3 242 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 POMT1Q9Y6A1 747 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 GLCEO94923 617 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 PAX1P15863 534 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 LSSP48449 732 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 RAP1AP62834 184 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 MRPS21P82921 87 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 MLC1Q15049 377 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 SLC48A1Q6P1K1 146 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 ZNF836Q6ZNA1 936 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 CD163Q86VB7 1156 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 FAM3CQ92520 227 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 MR1Q95460 341 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 RELTQ969Z4 430 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 SEH1LQ96EE3 360 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 PARP12Q9H0J9 701 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 CES1P1Q9UKY3 287 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 AMDHD2Q9Y303 409 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 HEBP2Q9Y5Z4 205 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 MTCH2Q9Y6C9 303 aa12.6□□□□□ -0.39
GTF3C1-203ENST00000562609 TRBV6-7A0A0A0MS04 114 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 ZNF736B4DX44 427 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 UMAD1C9J7I0 102 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 PHOX2AO14813 284 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 HCRTR1O43613 425 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 CYB5AP00167 134 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 SFTPBP07988 381 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 SLC6A9P48067 706 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 PDX1P52945 283 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 HSD11B2P80365 405 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 RHEBQ15382 184 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 ZNF674Q2M3X9 581 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 C14orf28Q4W4Y0 310 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 SLC35D3Q5M8T2 416 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 DNLZQ5SXM8 178 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 SLC25A42Q86VD7 318 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 CDK20Q8IZL9 346 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 HIST3H2BBQ8N257 126 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 BHLHE23Q8NDY6 225 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 FLVCR1-AS1Q8TAF5 88 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 ROBO4Q8WZ75 1007 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 Q96M85 177 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 NKX3-1Q99801 234 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 TAF9BQ9HBM6 251 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 CRLF2Q9HC73 371 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 SIRT7Q9NRC8 400 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 A6NCN8 305 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 OR5H15A6NDH6 313 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 OR5H1A6NKK0 313 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 A8MWP6 167 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 ZNF587BE7ETH6 402 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 MKRN2OSH3BPM6 223 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 EREGO14944 169 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 SRPX2O60687 465 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 CYTIPO60759 359 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 IGHV4-34P06331 123 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 CTSBP07858 339 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 FBXO45P0C2W1 286 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 RNH1P13489 461 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 RAB4AP20338 218 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 CSRP1P21291 193 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 CRABP1P29762 137 aa12.59□□□□□ -0.39
GTF3C1-203ENST00000562609 CEACAM6P40199 344 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms