RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 RSG1Q9BU20 258 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 FGF23Q9GZV9 251 aaPredicted RBP1.56□□□□□ -2.16
DENND4A-205ENST00000562540 MTFP1Q9UDX5 166 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 PITPNC1Q9UKF7 332 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 AKNAQ7Z591 1439 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 TRBV9A0A0B4J1U6 114 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 A0A1B0GW55 424 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 C5orf63A6NC05 138 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 ZNF233A6NK53 670 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 K7EM74 188 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 EIF4E2O60573 245 aaKnown RBP1.55□□□□□ -2.16
DENND4A-205ENST00000562540 FTH1P02794 183 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 SERPINE2P07093 398 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 CTSLP07711 333 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 DUX4L2P0CJ85 424 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 DUX4L3P0CJ86 424 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 DUX4L5P0CJ88 424 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 DUX4L6P0CJ89 424 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 DUX4L7P0CJ90 424 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 RBM34P42696 430 aaKnown RBP1.55□□□□□ -2.16
DENND4A-205ENST00000562540 CCNG1P51959 295 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 ZNF616Q08AN1 781 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 SELENBP1Q13228 472 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 KIR2DS1Q14954 304 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 TRAM2Q15035 370 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 RBMY1FQ15415 496 aaKnown RBP1.55□□□□□ -2.16
DENND4A-205ENST00000562540 MRPL23Q16540 153 aaKnown RBP1.55□□□□□ -2.16
DENND4A-205ENST00000562540 ADNP2Q6IQ32 1131 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 MBOAT2Q6ZWT7 520 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 KRTAP13-1Q8IUC0 172 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 CBR4Q8N4T8 237 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 CSGALNACT2Q8N6G5 542 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 TTLQ8NG68 377 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 CCDC77Q9BR77 488 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 ANKRD60Q9BZ19 345 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 NEUROG2Q9H2A3 272 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 DUX4Q9UBX2 424 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 PALLDQ8WX93 1383 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.55□□□□□ -2.16
DENND4A-205ENST00000562540 PRR14LQ5THK1 2151 aa1.55□□□□□ -2.16
DENND4A-205ENST00000562540 TRBV11-1A0A0K0K1C0 115 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 NCBP2LA6PVI3 153 aaKnown RBP1.54□□□□□ -2.16
DENND4A-205ENST00000562540 GABRR3A8MPY1 467 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 SYCE1LA8MT33 242 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 NDUFC2-KCTD14E9PQ53 114 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 LGALS9O00182 355 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 AP3B1O00203 1094 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 EIF3HO15372 352 aaKnown RBP eCLIP1.54□□□□□ -2.16
DENND4A-205ENST00000562540 CLDN11O75508 207 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 KRT14P02533 472 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 IGKV4-1P06312 121 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 ATF6P18850 670 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 IL32P24001 234 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 PBLDP30039 288 aaPredicted RBP1.54□□□□□ -2.16
DENND4A-205ENST00000562540 CRISP1P54107 249 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 KRTAP12-4P60329 112 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 RPS23P62266 143 aaKnown RBP1.54□□□□□ -2.16
DENND4A-205ENST00000562540 RPL23P62829 140 aaKnown RBP1.54□□□□□ -2.16
DENND4A-205ENST00000562540 PPIDQ08752 370 aaKnown RBP1.54□□□□□ -2.16
DENND4A-205ENST00000562540 ART3Q13508 389 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 CHRNA6Q15825 494 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 PGGHGQ32M88 737 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 HSP90AB3PQ58FF7 597 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 RNASE13Q5GAN3 156 aaKnown RBP1.54□□□□□ -2.16
DENND4A-205ENST00000562540 TPTE2P1Q5T6R2 138 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 CENPQQ7L2Z9 268 aaPredicted RBP1.54□□□□□ -2.16
DENND4A-205ENST00000562540 FAM71AQ8IYT1 594 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 GTPBP8Q8N3Z3 284 aaPredicted RBP1.54□□□□□ -2.16
DENND4A-205ENST00000562540 NPWQ8N729 165 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 OR5K2Q8NHB8 316 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 LYPD6BQ8NI32 183 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 C20orf24Q9BUV8 137 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 ANKRA2Q9H9E1 313 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 TMEM27Q9HBJ8 222 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 TMEM165Q9HC07 324 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 ZNF160Q9HCG1 818 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 RETNQ9HD89 108 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 MYOZ1Q9NP98 299 aaPredicted RBP1.54□□□□□ -2.16
DENND4A-205ENST00000562540 EXOSC4Q9NPD3 245 aaKnown RBP1.54□□□□□ -2.16
DENND4A-205ENST00000562540 MTCH1Q9NZJ7 389 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 CBY1Q9Y3M2 126 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 PCNX2A6NKB5 2137 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 PLXNB1O43157 2135 aa1.54□□□□□ -2.16
DENND4A-205ENST00000562540 IGHV1-69DA0A0B4J2H0 117 aa1.53□□□□□ -2.16
DENND4A-205ENST00000562540 IGHV7-4-1A0A0J9YVY3 117 aa1.53□□□□□ -2.16
DENND4A-205ENST00000562540 OR2AG2A6NM03 316 aa1.53□□□□□ -2.16
DENND4A-205ENST00000562540 KRBOX1C9JBD0 128 aa1.53□□□□□ -2.16
DENND4A-205ENST00000562540 H7C0C1 242 aa1.53□□□□□ -2.16
DENND4A-205ENST00000562540 H7C1H1 209 aa1.53□□□□□ -2.16
DENND4A-205ENST00000562540 POLR1CO15160 346 aaPredicted RBP1.53□□□□□ -2.16
DENND4A-205ENST00000562540 CHMP2AO43633 222 aa1.53□□□□□ -2.16
DENND4A-205ENST00000562540 EIF1BO60739 113 aaKnown RBP1.53□□□□□ -2.16
DENND4A-205ENST00000562540 FLOT1O75955 427 aa1.53□□□□□ -2.16
DENND4A-205ENST00000562540 SNX4O95219 450 aa1.53□□□□□ -2.16
DENND4A-205ENST00000562540 PAHP00439 452 aa1.53□□□□□ -2.16
DENND4A-205ENST00000562540 IGHV3-11P01762 117 aa1.53□□□□□ -2.16
DENND4A-205ENST00000562540 GTF2E2P29084 291 aaKnown RBP1.53□□□□□ -2.16
DENND4A-205ENST00000562540 OR1E1P30953 314 aa1.53□□□□□ -2.16
DENND4A-205ENST00000562540 OTX1P32242 354 aaPredicted RBP1.53□□□□□ -2.16
DENND4A-205ENST00000562540 TALDO1P37837 337 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms