RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 A0A1B0GWJ7 208 aa13.96□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 IQCF6A8MYZ5 107 aa13.96□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 F5H5P2 479 aa13.96□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 CLDN34H7C241 214 aa13.96□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 TXNDC12O95881 172 aa13.96□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 PLATP00750 562 aa13.96□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 SRP9P49458 86 aaKnown RBP13.96□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 PRSS12P56730 875 aa13.96□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 RSPO1Q2MKA7 263 aaPredicted RBP13.96□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 ZNF404Q494X3 552 aa13.96□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 FGD3Q5JSP0 725 aa13.96□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 FAM201AQ5SY85 155 aa13.96□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 CORO6Q6QEF8 472 aa13.96□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 DPY19L2P2Q6ZN68 376 aa13.96□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.96□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 GJC3Q8NFK1 279 aa13.96□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 SLC25A28Q96A46 364 aa13.96□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 UPRTQ96BW1 309 aa13.96□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 COQ7Q99807 217 aa13.96□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 HDHD2Q9H0R4 259 aa13.96□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 UNKLQ9H9P5 680 aaKnown RBP13.96□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 IGLV1-36A0A0B4J1U3 117 aa13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 TRAV40A0A0B4J280 105 aa13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 MDFIC2A0A1B0GVS7 189 aa13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 DIRAS1O95057 198 aa13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 CPT2P23786 658 aa13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 PMELP40967 661 aa13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 CENPAP49450 140 aa13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 GNB2P62879 340 aa13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 COX10Q12887 443 aa13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 ZNF181Q2M3W8 571 aa13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 KRTAP27-1Q3LI81 207 aa13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 LEG1Q6P5S2 330 aa13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 BTNL3Q6UXE8 466 aa13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 LRRN1Q6UXK5 716 aa13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 CFAP77Q6ZQR2 320 aa13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 COLCA1Q6ZS62 124 aa13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 FAM86B1Q8N7N1 296 aa13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 RAB40AQ8WXH6 277 aa13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 C7orf34Q96L11 122 aa13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 KCTD14Q9BQ13 255 aaPredicted RBP13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 FUZQ9BT04 418 aa13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 MIOXQ9UGB7 285 aa13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 RPS6KA6Q9UK32 745 aa13.95□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 UNC119BA6NIH7 251 aa13.94□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 FSTL3O95633 263 aa13.94□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 PPP1R3DO95685 299 aa13.94□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 HLA-DPB1P04440 258 aa13.94□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 RHCEP18577 417 aa13.94□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 RPS6KA3P51812 740 aa13.94□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 SMARCD3Q6STE5 483 aa13.94□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 OR6V1Q8N148 313 aa13.94□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 SLC26A10Q8NG04 563 aa13.94□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 OR52J3Q8NH60 311 aa13.94□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 NEIL1Q96FI4 390 aaPredicted RBP13.94□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 CCDC134Q9H6E4 229 aa13.94□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 EFCAB1Q9HAE3 211 aa13.94□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 ABCD2Q9UBJ2 740 aa13.94□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 B9D1Q9UPM9 204 aa13.94□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 AURKCQ9UQB9 309 aa13.94□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 FAM32AQ9Y421 112 aaKnown RBP13.94□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 KIR2DS1A0A191URI9 304 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 ACSM4P0C7M7 580 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 FPR3P25089 353 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 CRABP1P29762 137 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 GATA4P43694 442 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 MTNR1AP48039 350 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 NUDT2P50583 147 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 IL13RA1P78552 427 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 MAB21L1Q13394 359 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 GK2Q14410 553 aaPredicted RBP13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 SLC18B1Q6NT16 456 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 PGM2L1Q6PCE3 622 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 DNM1P34Q6PK57 102 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 LYPD2Q6UXB3 125 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 HACD2Q6Y1H2 254 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 NAA40Q86UY6 237 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 LINC00346Q8IVM7 164 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 OR8B3Q8NGG8 313 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 FANK1Q8TC84 345 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 PLEKHA8Q96JA3 519 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 DHRS1Q96LJ7 313 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 ERMAPQ96PL5 475 aaPredicted RBP13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 OR8B2Q96RD0 313 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 NMNAT3Q96T66 252 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 SRA1Q9HD15 236 aaKnown RBP13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 TMEM100Q9NV29 134 aa13.93□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 LRRC30A6NM36 301 aa13.92□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 MDKP21741 143 aaPredicted RBP13.92□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 MDH1P40925 334 aaKnown RBP13.92□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 PITPNBP48739 271 aa13.92□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 HOXA4Q00056 320 aaPredicted RBP13.92□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 BRD3OSQ6XYD6 125 aa13.92□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 ZNF841Q6ZN19 808 aa13.92□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 NLRC3Q7RTR2 1065 aa13.92□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 C1orf87Q8N0U7 546 aa13.92□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 FITM2Q8N6M3 262 aa13.92□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 C19orf18Q8NEA5 215 aa13.92□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 NUDT16L1Q9BRJ7 211 aaKnown RBP13.92□□□□□ -0.18
VPS9D1-AS1-201ENST00000562298 CDADC1Q9BWV3 514 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms