RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 OAFQ86UD1 273 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 LINC00346Q8IVM7 164 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 LRRC8CQ8TDW0 803 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 TLCD1Q96CP7 247 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 ZNF570Q96NI8 536 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 CCDC28BQ9BUN5 200 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 SYT4Q9H2B2 425 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 ACOXLQ9NUZ1 547 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 STX18Q9P2W9 335 aaKnown RBP9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 A4GNTQ9UNA3 340 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 GMEB1Q9Y692 573 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 IGHV1-69DA0A0B4J2H0 117 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 A0A1B0GUS0 222 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 C5orf63A6NC05 138 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 OR6C6A6NF89 314 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 LRRC30A6NM36 301 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 ZNF879B4DU55 563 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 ADAM20O43506 726 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 ENSAO43768 121 aaKnown RBP9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 OR10H3O60404 316 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 IGHV1-69P01742 117 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 TFF1P04155 84 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 PPIAL4GP0DN37 164 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 IRF2P14316 349 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 RAC2P15153 192 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 CLEC12AQ5QGZ9 265 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 NANOGP8Q6NSW7 305 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 VTCN1Q7Z7D3 282 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 PIP4P2Q8N4L2 257 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 OR13G1Q8NGZ3 307 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 C10orf82Q8WW14 230 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 SSMEM1Q8WWF3 244 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 GATAD2BQ8WXI9 593 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 C7orf26Q96N11 449 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 WDFY2Q96P53 400 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 PRDM13Q9H4Q3 707 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 TMBIM4Q9HC24 238 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 NOX4Q9NPH5 578 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 ADA2Q9NZK5 511 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 GRHPRQ9UBQ7 328 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 RPS6KA6Q9UK32 745 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 FOXJ3Q9UPW0 622 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 NOTCH3Q9UM47 2321 aa9.66□□□□□ -0.86
NSMCE1-202ENST00000561960 ZNF816-ZNF321PA0A0X1KG74 233 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 GMNCA6NCL1 334 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 A6NIZ1 184 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 F5H5K5 113 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 XKRYO14609 159 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 PHYHO14832 338 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 TNFRSF13BO14836 293 aaPredicted RBP9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 PIN1P1O15428 100 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 CSF1P09603 554 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 COX5BP10606 129 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 NR2C1P13056 603 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 CA6P23280 308 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 IER3P46695 156 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 GMFBP60983 142 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 RAP1BP61224 184 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 RAP1AP62834 184 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 AQP6Q13520 282 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 KRR1Q13601 381 aaKnown RBP9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 OCLNQ16625 522 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 BEAN1Q3B7T3 259 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 BEND6Q5SZJ8 279 aaPredicted RBP9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 INTS11Q5TA45 600 aaKnown RBP9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 METTL11BQ5VVY1 283 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 FBXW12Q6X9E4 464 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 DCDC5Q6ZRR9 648 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 PTCHD4Q6ZW05 846 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 CCDC80Q76M96 950 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 VMO1Q7Z5L0 202 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 DPP10Q8N608 796 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 LIPHQ8WWY8 451 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 ST8SIA4Q92187 359 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 DYRK2Q92630 601 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 SLCO4A1Q96BD0 722 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 SEH1LQ96EE3 360 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 FAM46AQ96IP4 442 aaKnown RBP9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 ECSITQ9BQ95 431 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 SIRPDQ9H106 197 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 FN3KQ9H479 309 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 SIRT7Q9NRC8 400 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 TMEM100Q9NV29 134 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 ONECUT1Q9UBC0 465 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 N6AMT1Q9Y5N5 214 aa9.65□□□□□ -0.86
NSMCE1-202ENST00000561960 PRSS37A4D1T9 235 aa9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 NPIPB13A6NJU9 1138 aa9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 IQCF6A8MYZ5 107 aa9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 NPIPB4C9JG80 1138 aa9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 P2RY10O00398 339 aa9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 DCTN6O00399 190 aa9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 FFAR1O14842 300 aa9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 CLPXO76031 633 aa9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 GRPP07492 148 aa9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 PDCD1Q15116 288 aa9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 RSPO1Q2MKA7 263 aaPredicted RBP9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 C2orf68Q2NKX9 166 aa9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 DHRS7BQ6IAN0 325 aaPredicted RBP9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 ZNF730Q6ZMV8 503 aa9.64□□□□□ -0.87
NSMCE1-202ENST00000561960 CFAP77Q6ZQR2 320 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms