RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 UTF1Q5T230 341 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 SLX4IPQ5VYV7 408 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 LIPJQ5W064 366 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 KCTD16Q68DU8 428 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 H2AFVQ71UI9 128 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 DPY19L4Q7Z388 723 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 RNF130Q86XS8 419 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 CLVS1Q8IUQ0 354 aaPredicted RBP3.46□□□□□ -1.86
LRRC28-222ENST00000561431 APRG1Q8IVJ8 170 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 FUNDC1Q8IVP5 155 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 CYP4Z2PQ8N1L4 340 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 SLC25A45Q8N413 288 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 LRRC75AQ8NAA5 344 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 MFSD9Q8NBP5 474 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 OR5T2Q8NGG2 359 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 MCOLN3Q8TDD5 553 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 IFT81Q8WYA0 676 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 AP3S1Q92572 193 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 CDS1Q92903 461 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 S100PBPQ96BU1 408 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 MRPL53Q96EL3 112 aaKnown RBP3.46□□□□□ -1.86
LRRC28-222ENST00000561431 PELI1Q96FA3 418 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 C4orf45Q96LM5 186 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 ZNF641Q96N77 438 aaPredicted RBP3.46□□□□□ -1.86
LRRC28-222ENST00000561431 ZNF599Q96NL3 588 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 PRAP1Q96NZ9 151 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 IL4I1Q96RQ9 567 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 MAP3K3Q99759 626 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 UTP23Q9BRU9 249 aaKnown RBP3.46□□□□□ -1.86
LRRC28-222ENST00000561431 ZNF670Q9BS34 389 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 RAB11FIP5Q9BXF6 653 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 CALN1Q9BXU9 219 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 SLC17A9Q9BYT1 436 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 SHARPINQ9H0F6 387 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 C1orf198Q9H425 327 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 KIR3DX1Q9H7L2 352 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 C10orf88Q9H8K7 445 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 ARMC1Q9NVT9 282 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 VNN3Q9NY84 501 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 MRPS28Q9Y2Q9 187 aaKnown RBP3.46□□□□□ -1.86
LRRC28-222ENST00000561431 POLDIP2Q9Y2S7 368 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 NEUROG3Q9Y4Z2 214 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 COLEC10Q9Y6Z7 277 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 U3KQA8 63 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 IGF2RP11717 2491 aa3.46□□□□□ -1.86
LRRC28-222ENST00000561431 A0A1W2PNV4 684 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 SYCE1LA8MT33 242 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 C17orf105B2RV13 164 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 E5RGE8 158 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 F8VVB4 439 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 F8VWA3 439 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 ACOX3O15254 700 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 SIVA1O15304 175 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 PSMG1O95456 288 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 CLDN9O95484 217 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 TXNDC12O95881 172 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 IFNA5P01569 189 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 AMBPP02760 352 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 FAM157CP0CG43 387 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 CT45A8P0DMV1 189 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 CT45A9P0DMV2 189 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 MYL2P10916 166 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 SLC2A2P11168 524 aaPredicted RBP3.45□□□□□ -1.86
LRRC28-222ENST00000561431 UQCRBP14927 111 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 XRCC1P18887 633 aaPredicted RBP3.45□□□□□ -1.86
LRRC28-222ENST00000561431 ZP3P21754 424 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 KDELR1P24390 212 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 CXCR2P25025 360 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 HTR2CP28335 458 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 PRDX3P30048 256 aaKnown RBP3.45□□□□□ -1.86
LRRC28-222ENST00000561431 CALCRP30988 508 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 UGT2B10P36537 528 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 MAGEA6P43360 314 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 MARCKSL1P49006 195 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 NR0B1P51843 470 aaKnown RBP3.45□□□□□ -1.86
LRRC28-222ENST00000561431 CLDN6P56747 220 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 KCNK10P57789 538 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 RAB10P61026 200 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 MAXP61244 160 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 BCL2L1Q07817 233 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 RBM39Q14498 530 aaKnown RBP3.45□□□□□ -1.86
LRRC28-222ENST00000561431 OR4D1Q15615 310 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 ZNHIT3Q15649 155 aaPredicted RBP3.45□□□□□ -1.86
LRRC28-222ENST00000561431 CT45A2Q5DJT8 189 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 ZNF542PQ5EBM4 170 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 FAM182AQ5T1J6 154 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 HES5Q5TA89 166 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 AGAP7PQ5VUJ5 663 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 SLC22A10Q63ZE4 541 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 FAM53AQ6NSI3 398 aaPredicted RBP3.45□□□□□ -1.86
LRRC28-222ENST00000561431 LRRN1Q6UXK5 716 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 Q6ZSR6 202 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 FCRLAQ7L513 359 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 PTAR1Q7Z6K3 402 aaPredicted RBP3.45□□□□□ -1.86
LRRC28-222ENST00000561431 MARCH9Q86YJ5 346 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 LINC00518Q8N0U6 118 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 ATPAF2Q8N5M1 289 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 CLDN19Q8N6F1 224 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 EID2Q8N6I1 236 aa3.45□□□□□ -1.86
LRRC28-222ENST00000561431 CDRT4Q8N9R6 151 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms