RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 SLCO4A1Q96BD0 722 aa17.51■□□□□ 0.39
TPM1-232ENST00000561425 ATF6BQ99941 703 aa17.51■□□□□ 0.39
TPM1-232ENST00000561425 CDADC1Q9BWV3 514 aa17.51■□□□□ 0.39
TPM1-232ENST00000561425 BEX2Q9BXY8 128 aa17.51■□□□□ 0.39
TPM1-232ENST00000561425 EGLN1Q9GZT9 426 aa17.51■□□□□ 0.39
TPM1-232ENST00000561425 SHARPINQ9H0F6 387 aa17.51■□□□□ 0.39
TPM1-232ENST00000561425 CMC2Q9NRP2 79 aa17.51■□□□□ 0.39
TPM1-232ENST00000561425 SOX14O95416 240 aa17.5■□□□□ 0.39
TPM1-232ENST00000561425 PSKH1P11801 424 aa17.5■□□□□ 0.39
TPM1-232ENST00000561425 OTX1P32242 354 aaPredicted RBP17.5■□□□□ 0.39
TPM1-232ENST00000561425 FLOT2Q14254 428 aa17.5■□□□□ 0.39
TPM1-232ENST00000561425 HFEQ30201 348 aa17.5■□□□□ 0.39
TPM1-232ENST00000561425 LINC01590Q5TEZ4 76 aa17.5■□□□□ 0.39
TPM1-232ENST00000561425 PITX2Q99697 317 aa17.5■□□□□ 0.39
TPM1-232ENST00000561425 MDFIQ99750 246 aa17.5■□□□□ 0.39
TPM1-232ENST00000561425 DDX28Q9NUL7 540 aaKnown RBP17.5■□□□□ 0.39
TPM1-232ENST00000561425 FAM157AC9JC47 383 aa17.49■□□□□ 0.39
TPM1-232ENST00000561425 FKBP6O75344 327 aa17.49■□□□□ 0.39
TPM1-232ENST00000561425 DEAF1O75398 565 aaPredicted RBP17.49■□□□□ 0.39
TPM1-232ENST00000561425 HLA-DQA2P01906 255 aa17.49■□□□□ 0.39
TPM1-232ENST00000561425 ZNF823P16415 610 aa17.49■□□□□ 0.39
TPM1-232ENST00000561425 SPI1P17947 270 aa17.49■□□□□ 0.39
TPM1-232ENST00000561425 GRK5P34947 590 aa17.49■□□□□ 0.39
TPM1-232ENST00000561425 CCNIQ14094 377 aa17.49■□□□□ 0.39
TPM1-232ENST00000561425 HLXQ14774 488 aaPredicted RBP17.49■□□□□ 0.39
TPM1-232ENST00000561425 ZNF771Q7L3S4 317 aaPredicted RBP17.49■□□□□ 0.39
TPM1-232ENST00000561425 NAA40Q86UY6 237 aa17.49■□□□□ 0.39
TPM1-232ENST00000561425 PROKR2Q8NFJ6 384 aa17.49■□□□□ 0.39
TPM1-232ENST00000561425 NTN4Q9HB63 628 aa17.49■□□□□ 0.39
TPM1-232ENST00000561425 TREM2Q9NZC2 230 aa17.49■□□□□ 0.39
TPM1-232ENST00000561425 DNAJB9Q9UBS3 223 aa17.49■□□□□ 0.39
TPM1-232ENST00000561425 IL19Q9UHD0 177 aa17.49■□□□□ 0.39
TPM1-232ENST00000561425 WIPI2Q9Y4P8 454 aa17.49■□□□□ 0.39
TPM1-232ENST00000561425 COMMD3-BMI1R4GMX3 469 aa17.49■□□□□ 0.39
TPM1-232ENST00000561425 TVP23AA6NH52 213 aa17.48■□□□□ 0.39
TPM1-232ENST00000561425 CLDN25C9JDP6 229 aa17.48■□□□□ 0.39
TPM1-232ENST00000561425 TPD52L2O43399 206 aaKnown RBP17.48■□□□□ 0.39
TPM1-232ENST00000561425 IFNA2P01563 188 aa17.48■□□□□ 0.39
TPM1-232ENST00000561425 TNFAIP6P98066 277 aaPredicted RBP17.48■□□□□ 0.39
TPM1-232ENST00000561425 CR1LQ2VPA4 569 aa17.48■□□□□ 0.39
TPM1-232ENST00000561425 LYPD4Q6UWN0 246 aa17.48■□□□□ 0.39
TPM1-232ENST00000561425 OR8G5Q8NG78 346 aa17.48■□□□□ 0.39
TPM1-232ENST00000561425 OR51L1Q8NGJ5 315 aa17.48■□□□□ 0.39
TPM1-232ENST00000561425 OR9Q1Q8NGQ5 310 aa17.48■□□□□ 0.39
TPM1-232ENST00000561425 CCL17Q92583 94 aa17.48■□□□□ 0.39
TPM1-232ENST00000561425 RAB3IPQ96QF0 476 aaPredicted RBP17.48■□□□□ 0.39
TPM1-232ENST00000561425 YY1AP1Q9H869 796 aa17.48■□□□□ 0.39
TPM1-232ENST00000561425 WDR76Q9H967 626 aa17.48■□□□□ 0.39
TPM1-232ENST00000561425 PTTG3PQ9NZH4 202 aa17.48■□□□□ 0.39
TPM1-232ENST00000561425 PDP1Q9P0J1 537 aaPredicted RBP17.48■□□□□ 0.39
TPM1-232ENST00000561425 IQCF6A8MYZ5 107 aa17.47■□□□□ 0.39
TPM1-232ENST00000561425 GNGT2O14610 69 aa17.47■□□□□ 0.39
TPM1-232ENST00000561425 CIB2O75838 187 aa17.47■□□□□ 0.39
TPM1-232ENST00000561425 IFNGP01579 166 aa17.47■□□□□ 0.39
TPM1-232ENST00000561425 CLUP10909 449 aa17.47■□□□□ 0.39
TPM1-232ENST00000561425 FMO3P31513 532 aa17.47■□□□□ 0.39
TPM1-232ENST00000561425 RPS27P42677 84 aaKnown RBP17.47■□□□□ 0.39
TPM1-232ENST00000561425 BLVRAP53004 296 aa17.47■□□□□ 0.39
TPM1-232ENST00000561425 SLC3A1Q07837 685 aa17.47■□□□□ 0.39
TPM1-232ENST00000561425 ACSM5Q6NUN0 579 aa17.47■□□□□ 0.39
TPM1-232ENST00000561425 SPATA24Q86W54 205 aa17.47■□□□□ 0.39
TPM1-232ENST00000561425 ZNF283Q8N7M2 679 aa17.47■□□□□ 0.39
TPM1-232ENST00000561425 ZNF511Q8NB15 262 aa17.47■□□□□ 0.39
TPM1-232ENST00000561425 RAB1CQ92928 201 aa17.47■□□□□ 0.39
TPM1-232ENST00000561425 NRBF2Q96F24 287 aa17.47■□□□□ 0.39
TPM1-232ENST00000561425 HCAR1Q9BXC0 346 aa17.47■□□□□ 0.39
TPM1-232ENST00000561425 MARCH7Q9H992 704 aa17.47■□□□□ 0.39
TPM1-232ENST00000561425 TMEFF2Q9UIK5 374 aaPredicted RBP17.47■□□□□ 0.39
TPM1-232ENST00000561425 SVEP1Q4LDE5 3571 aa17.46■□□□□ 0.39
TPM1-232ENST00000561425 F5H5K5 113 aa17.46■□□□□ 0.39
TPM1-232ENST00000561425 GYPBP06028 91 aa17.46■□□□□ 0.39
TPM1-232ENST00000561425 MSMBP08118 114 aa17.46■□□□□ 0.39
TPM1-232ENST00000561425 OSMP13725 252 aa17.46■□□□□ 0.39
TPM1-232ENST00000561425 ANXA8P13928 327 aa17.46■□□□□ 0.39
TPM1-232ENST00000561425 ENTPD1P49961 510 aa17.46■□□□□ 0.39
TPM1-232ENST00000561425 TPTEP56180 551 aa17.46■□□□□ 0.39
TPM1-232ENST00000561425 CDK5Q00535 292 aa17.46■□□□□ 0.39
TPM1-232ENST00000561425 MVKQ03426 396 aa17.46■□□□□ 0.39
TPM1-232ENST00000561425 AVPI1Q5T686 147 aa17.46■□□□□ 0.39
TPM1-232ENST00000561425 OR2T2Q6IF00 324 aa17.46■□□□□ 0.39
TPM1-232ENST00000561425 HS3ST5Q8IZT8 346 aa17.46■□□□□ 0.39
TPM1-232ENST00000561425 OR2Z1Q8NG97 314 aa17.46■□□□□ 0.39
TPM1-232ENST00000561425 TEX47Q8TBZ9 253 aa17.46■□□□□ 0.39
TPM1-232ENST00000561425 ST7LQ8TDW4 575 aa17.46■□□□□ 0.39
TPM1-232ENST00000561425 UTP4Q969X6 686 aaKnown RBP17.46■□□□□ 0.39
TPM1-232ENST00000561425 TIMD4Q96H15 378 aa17.46■□□□□ 0.39
TPM1-232ENST00000561425 SLC30A2Q9BRI3 323 aa17.46■□□□□ 0.39
TPM1-232ENST00000561425 NARFLQ9H6Q4 476 aa17.46■□□□□ 0.39
TPM1-232ENST00000561425 ZNF665Q9H7R5 613 aa17.46■□□□□ 0.39
TPM1-232ENST00000561425 CUBNO60494 3623 aa17.46■□□□□ 0.38
TPM1-232ENST00000561425 RIIAD1A6NNX1 92 aa17.45■□□□□ 0.38
TPM1-232ENST00000561425 ZNF593O00488 134 aaPredicted RBP17.45■□□□□ 0.38
TPM1-232ENST00000561425 IGHV2-5P01817 119 aa17.45■□□□□ 0.38
TPM1-232ENST00000561425 ZNF3P17036 446 aa17.45■□□□□ 0.38
TPM1-232ENST00000561425 TNFRSF1AP19438 455 aa17.45■□□□□ 0.38
TPM1-232ENST00000561425 PRKACGP22612 351 aa17.45■□□□□ 0.38
TPM1-232ENST00000561425 TNFSF4P23510 183 aa17.45■□□□□ 0.38
TPM1-232ENST00000561425 GK2Q14410 553 aaPredicted RBP17.45■□□□□ 0.38
TPM1-232ENST00000561425 SLC27A4Q6P1M0 643 aa17.45■□□□□ 0.38
TPM1-232ENST00000561425 DCXRQ7Z4W1 244 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms