RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 APOL3O95236 402 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 LY86O95711 162 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 IGF2P01344 180 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 DBIP07108 87 aaKnown RBP4.26□□□□□ -1.73
HERC1-213ENST00000561359 G6PDP11413 515 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 PRG2P13727 222 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 KITLGP21583 273 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 PAICSP22234 425 aaKnown RBP4.26□□□□□ -1.73
HERC1-213ENST00000561359 MYF6P23409 242 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 PRPH2P23942 346 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 ATP5F1P24539 256 aaPredicted RBP4.26□□□□□ -1.73
HERC1-213ENST00000561359 PAX6P26367 422 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 PMELP40967 661 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 RGS6P49758 472 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 VEGFCP49767 419 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 ZNF84P51523 738 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 ZNF75DP51815 510 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 UBE2E1P51965 193 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 PRKAA2P54646 552 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 IL5RAQ01344 420 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 ACSM1Q08AH1 577 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 CALCOCO2Q13137 446 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 CNN3Q15417 329 aaKnown RBP4.26□□□□□ -1.73
HERC1-213ENST00000561359 OR8B8Q15620 311 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 SYPL1Q16563 259 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 SFRP4Q6FHJ7 346 aaPredicted RBP4.26□□□□□ -1.73
HERC1-213ENST00000561359 Q6ZSN1 163 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 OVCH2Q7RTZ1 564 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 PXKQ7Z7A4 578 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 SLC22A9Q8IVM8 553 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 PEX5LQ8IYB4 626 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 NATD1Q8N6N6 113 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 C10orf53Q8N6V4 93 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 ANKFN1Q8N957 763 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 SPC24Q8NBT2 197 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 OR4X2Q8NGF9 303 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 OR5AN1Q8NGI8 311 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 OR11L1Q8NGX0 322 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 OR13G1Q8NGZ3 307 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 ADAMTS16Q8TE57 1224 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 TMEM54Q969K7 222 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 ZNF566Q969W8 418 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 SLC7A6OSQ96CW6 309 aaPredicted RBP4.26□□□□□ -1.73
HERC1-213ENST00000561359 FCRL1Q96LA6 429 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 TRNT1Q96Q11 434 aaKnown RBP4.26□□□□□ -1.73
HERC1-213ENST00000561359 ZNF607Q96SK3 696 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 OSBPL9Q96SU4 736 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 SLC38A1Q9H2H9 487 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 MTHFD2LQ9H903 347 aaPredicted RBP4.26□□□□□ -1.73
HERC1-213ENST00000561359 MEAF6Q9HAF1 191 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 EDA2RQ9HAV5 297 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 C20orf141Q9NUB4 165 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 RPS6KB2Q9UBS0 482 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 TMED5Q9Y3A6 229 aa4.26□□□□□ -1.73
HERC1-213ENST00000561359 EXOC1LA0A1B0GW35 172 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 CDHR4A6H8M9 788 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 TMEM114B3SHH9 223 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 F5H5P2 479 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 LGALS8O00214 317 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 DVL1O14640 695 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 HDAC3O15379 428 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 NDUFA2O43678 99 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 FAM20BO75063 409 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 GLRA3O75311 464 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 SLC22A3O75751 556 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 OR6A2O95222 327 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 LY6G6CO95867 125 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 GYPAP02724 150 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 LINC00032P0C843 101 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 ADORA3P0DMS8 318 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 ZNF32P17041 273 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 RPS4Y1P22090 263 aaKnown RBP4.25□□□□□ -1.73
HERC1-213ENST00000561359 CHI3L1P36222 383 aaPredicted RBP4.25□□□□□ -1.73
HERC1-213ENST00000561359 MAGEA4P43358 317 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 MAGEA12P43365 314 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 LUMP51884 338 aaPredicted RBP4.25□□□□□ -1.73
HERC1-213ENST00000561359 CLNS1AP54105 237 aaKnown RBP4.25□□□□□ -1.73
HERC1-213ENST00000561359 RAB25P57735 213 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 ERVK-25P63136 954 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 HOXA4Q00056 320 aaPredicted RBP4.25□□□□□ -1.73
HERC1-213ENST00000561359 HOXC5Q00444 222 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 PSG4Q00888 419 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 AANATQ16613 207 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 C21orf62-AS1Q17RA5 79 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 PGS1Q32NB8 556 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 LIN52Q52LA3 116 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 CEP85LQ5SZL2 805 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 INTS11Q5TA45 600 aaKnown RBP4.25□□□□□ -1.73
HERC1-213ENST00000561359 NCR3LG1Q68D85 454 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 C5orf46Q6UWT4 87 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 SLC35D2Q76EJ3 337 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 SERPINA11Q86U17 422 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 TMEM219Q86XT9 240 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 NUDCD3Q8IVD9 361 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 CLECL1Q8IZS7 167 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 KRTCAP2Q8N6L1 136 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 NPEPL1Q8NDH3 523 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 OR4A15Q8NGL6 344 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 OR2T11Q8NH01 316 aa4.25□□□□□ -1.73
HERC1-213ENST00000561359 OR6X1Q8NH79 312 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms