RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 PPP1R8Q12972 351 aaKnown RBP13.54□□□□□ -0.24
LMX1B-204ENST00000561065 SLC27A4Q6P1M0 643 aa13.54□□□□□ -0.24
LMX1B-204ENST00000561065 GLCCI1Q86VQ1 547 aa13.54□□□□□ -0.24
LMX1B-204ENST00000561065 SLC26A10Q8NG04 563 aa13.54□□□□□ -0.24
LMX1B-204ENST00000561065 TMEM186Q96B77 213 aa13.54□□□□□ -0.24
LMX1B-204ENST00000561065 PITX2Q99697 317 aa13.54□□□□□ -0.24
LMX1B-204ENST00000561065 REPIN1Q9BWE0 567 aaKnown RBP13.54□□□□□ -0.24
LMX1B-204ENST00000561065 MSL2Q9HCI7 577 aa13.54□□□□□ -0.24
LMX1B-204ENST00000561065 HIF1ANQ9NWT6 349 aa13.54□□□□□ -0.24
LMX1B-204ENST00000561065 WIPI2Q9Y4P8 454 aa13.54□□□□□ -0.24
LMX1B-204ENST00000561065 DYSFO75923 2080 aa13.53□□□□□ -0.24
LMX1B-204ENST00000561065 ADH4P08319 380 aa13.53□□□□□ -0.24
LMX1B-204ENST00000561065 DBHP09172 617 aa13.53□□□□□ -0.24
LMX1B-204ENST00000561065 FCGR1AP12314 374 aa13.53□□□□□ -0.24
LMX1B-204ENST00000561065 SLC3A1Q07837 685 aa13.53□□□□□ -0.24
LMX1B-204ENST00000561065 PSG7Q13046 419 aa13.53□□□□□ -0.24
LMX1B-204ENST00000561065 MEP1BQ16820 701 aa13.53□□□□□ -0.24
LMX1B-204ENST00000561065 CCDC92Q53HC0 331 aaPredicted RBP13.53□□□□□ -0.24
LMX1B-204ENST00000561065 C1orf146Q5VVC0 180 aa13.53□□□□□ -0.24
LMX1B-204ENST00000561065 CCDC121Q6ZUS5 278 aa13.53□□□□□ -0.24
LMX1B-204ENST00000561065 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.53□□□□□ -0.24
LMX1B-204ENST00000561065 ATG16L2Q8NAA4 619 aa13.53□□□□□ -0.24
LMX1B-204ENST00000561065 SPTSSAQ969W0 71 aa13.53□□□□□ -0.24
LMX1B-204ENST00000561065 APOBEC3DQ96AK3 386 aaPredicted RBP13.53□□□□□ -0.24
LMX1B-204ENST00000561065 PLEKHA8Q96JA3 519 aa13.53□□□□□ -0.24
LMX1B-204ENST00000561065 ZNF665Q9H7R5 613 aa13.53□□□□□ -0.24
LMX1B-204ENST00000561065 ENOPH1Q9UHY7 261 aa13.53□□□□□ -0.24
LMX1B-204ENST00000561065 WNK2Q9Y3S1 2297 aa13.52□□□□□ -0.25
LMX1B-204ENST00000561065 CLDN25C9JDP6 229 aa13.52□□□□□ -0.25
LMX1B-204ENST00000561065 RER1O15258 196 aa13.52□□□□□ -0.25
LMX1B-204ENST00000561065 SURF4O15260 269 aa13.52□□□□□ -0.25
LMX1B-204ENST00000561065 TIMM8AO60220 97 aaPredicted RBP13.52□□□□□ -0.25
LMX1B-204ENST00000561065 POU1F1P28069 291 aa13.52□□□□□ -0.25
LMX1B-204ENST00000561065 GRK5P34947 590 aa13.52□□□□□ -0.25
LMX1B-204ENST00000561065 SLC25A1P53007 311 aa13.52□□□□□ -0.25
LMX1B-204ENST00000561065 TPTEP56180 551 aa13.52□□□□□ -0.25
LMX1B-204ENST00000561065 HIST1H3AP68431 136 aa13.52□□□□□ -0.25
LMX1B-204ENST00000561065 MALLQ13021 153 aa13.52□□□□□ -0.25
LMX1B-204ENST00000561065 HIST2H3PS2Q5TEC6 136 aa13.52□□□□□ -0.25
LMX1B-204ENST00000561065 Q6ZR03 302 aa13.52□□□□□ -0.25
LMX1B-204ENST00000561065 HIST2H3AQ71DI3 136 aa13.52□□□□□ -0.25
LMX1B-204ENST00000561065 ELMOD3Q96FG2 381 aa13.52□□□□□ -0.25
LMX1B-204ENST00000561065 C19orf24Q9BVV8 132 aa13.52□□□□□ -0.25
LMX1B-204ENST00000561065 PRRG3Q9BZD7 231 aa13.52□□□□□ -0.25
LMX1B-204ENST00000561065 SP140LQ9H930 580 aa13.52□□□□□ -0.25
LMX1B-204ENST00000561065 CMC2Q9NRP2 79 aa13.52□□□□□ -0.25
LMX1B-204ENST00000561065 KIF17Q9P2E2 1029 aa13.52□□□□□ -0.25
LMX1B-204ENST00000561065 CYB5R1Q9UHQ9 305 aa13.52□□□□□ -0.25
LMX1B-204ENST00000561065 LHFPL6Q9Y693 200 aa13.52□□□□□ -0.25
LMX1B-204ENST00000561065 SOX14O95416 240 aa13.51□□□□□ -0.25
LMX1B-204ENST00000561065 IGHV2-5P01817 119 aa13.51□□□□□ -0.25
LMX1B-204ENST00000561065 APOC1P02654 83 aa13.51□□□□□ -0.25
LMX1B-204ENST00000561065 CD55P08174 381 aa13.51□□□□□ -0.25
LMX1B-204ENST00000561065 OSMP13725 252 aa13.51□□□□□ -0.25
LMX1B-204ENST00000561065 RAC2P15153 192 aa13.51□□□□□ -0.25
LMX1B-204ENST00000561065 SELEP16581 610 aa13.51□□□□□ -0.25
LMX1B-204ENST00000561065 FASP25445 335 aa13.51□□□□□ -0.25
LMX1B-204ENST00000561065 SLC15A1P46059 708 aa13.51□□□□□ -0.25
LMX1B-204ENST00000561065 TAF13Q15543 124 aa13.51□□□□□ -0.25
LMX1B-204ENST00000561065 HFEQ30201 348 aa13.51□□□□□ -0.25
LMX1B-204ENST00000561065 SHQ1Q6PI26 577 aaKnown RBP13.51□□□□□ -0.25
LMX1B-204ENST00000561065 C1orf229Q6ZS94 237 aaPredicted RBP13.51□□□□□ -0.25
LMX1B-204ENST00000561065 PEG10Q86TG7 708 aaKnown RBP13.51□□□□□ -0.25
LMX1B-204ENST00000561065 SLC37A3Q8NCC5 494 aa13.51□□□□□ -0.25
LMX1B-204ENST00000561065 OR51F2Q8NH61 342 aa13.51□□□□□ -0.25
LMX1B-204ENST00000561065 HAVCR1Q96D42 359 aa13.51□□□□□ -0.25
LMX1B-204ENST00000561065 TIMD4Q96H15 378 aa13.51□□□□□ -0.25
LMX1B-204ENST00000561065 ATF6BQ99941 703 aa13.51□□□□□ -0.25
LMX1B-204ENST00000561065 HCAR1Q9BXC0 346 aa13.51□□□□□ -0.25
LMX1B-204ENST00000561065 G6PC2Q9NQR9 355 aa13.51□□□□□ -0.25
LMX1B-204ENST00000561065 PURGQ9UJV8 347 aaKnown RBP13.51□□□□□ -0.25
LMX1B-204ENST00000561065 STARD10Q9Y365 291 aa13.51□□□□□ -0.25
LMX1B-204ENST00000561065 AP4S1Q9Y587 144 aa13.51□□□□□ -0.25
LMX1B-204ENST00000561065 AVPP01185 164 aa13.5□□□□□ -0.25
LMX1B-204ENST00000561065 KITLGP21583 273 aa13.5□□□□□ -0.25
LMX1B-204ENST00000561065 SRP14P37108 136 aaKnown RBP13.5□□□□□ -0.25
LMX1B-204ENST00000561065 ZNF771Q7L3S4 317 aaPredicted RBP13.5□□□□□ -0.25
LMX1B-204ENST00000561065 CYB561A3Q8NBI2 242 aa13.5□□□□□ -0.25
LMX1B-204ENST00000561065 CCL17Q92583 94 aa13.5□□□□□ -0.25
LMX1B-204ENST00000561065 OTULINQ96BN8 352 aa13.5□□□□□ -0.25
LMX1B-204ENST00000561065 CMBLQ96DG6 245 aa13.5□□□□□ -0.25
LMX1B-204ENST00000561065 NIPSNAP1Q9BPW8 284 aa13.5□□□□□ -0.25
LMX1B-204ENST00000561065 RBM4Q9BWF3 364 aaKnown RBP13.5□□□□□ -0.25
LMX1B-204ENST00000561065 PLA2G12AQ9BZM1 189 aa13.5□□□□□ -0.25
LMX1B-204ENST00000561065 FN3KQ9H479 309 aa13.5□□□□□ -0.25
LMX1B-204ENST00000561065 ARMC1Q9NVT9 282 aa13.5□□□□□ -0.25
LMX1B-204ENST00000561065 VNN3Q9NY84 501 aa13.5□□□□□ -0.25
LMX1B-204ENST00000561065 NOP16Q9Y3C1 178 aaKnown RBP13.5□□□□□ -0.25
LMX1B-204ENST00000561065 PRR23D1E9PI22 279 aaPredicted RBP13.49□□□□□ -0.25
LMX1B-204ENST00000561065 F5H5K5 113 aa13.49□□□□□ -0.25
LMX1B-204ENST00000561065 G3V2T6 193 aa13.49□□□□□ -0.25
LMX1B-204ENST00000561065 EBAG9O00559 213 aa13.49□□□□□ -0.25
LMX1B-204ENST00000561065 PRR23D2P0DMB1 279 aaPredicted RBP13.49□□□□□ -0.25
LMX1B-204ENST00000561065 ANPEPP15144 967 aa13.49□□□□□ -0.25
LMX1B-204ENST00000561065 TNFRSF1AP19438 455 aa13.49□□□□□ -0.25
LMX1B-204ENST00000561065 PCMT1P22061 227 aa13.49□□□□□ -0.25
LMX1B-204ENST00000561065 CDK5R2Q13319 367 aa13.49□□□□□ -0.25
LMX1B-204ENST00000561065 CRMP1Q14194 572 aa13.49□□□□□ -0.25
LMX1B-204ENST00000561065 GINS1Q14691 196 aa13.49□□□□□ -0.25
LMX1B-204ENST00000561065 TEX30Q5JUR7 227 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms