RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 TMEM95Q3KNT9 176 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 ZNF718Q3SXZ3 478 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 GGTA1PQ4G0N0 100 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 CDONQ4KMG0 1287 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 SPATA46Q5T0L3 261 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 TTC19Q6DKK2 380 aaPredicted RBP2.94□□□□□ -1.94
HERC1-211ENST00000560983 NOXRED1Q6NXP6 359 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 C10orf99Q6UWK7 81 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 VRK2Q86Y07 508 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 Q8N7P7 452 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 OR4F6Q8NGB9 312 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 ZNF563Q8TA94 476 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 ZNF420Q8TAQ5 688 aaPredicted RBP2.94□□□□□ -1.94
HERC1-211ENST00000560983 SLC25A40Q8TBP6 338 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 TMEM163Q8TC26 289 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 ITLN1Q8WWA0 313 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 SELENOMQ8WWX9 145 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 CIDECQ96AQ7 238 aaPredicted RBP2.94□□□□□ -1.94
HERC1-211ENST00000560983 DDIT4LQ96D03 193 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 MS4A4EQ96PG1 132 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 OR2M2Q96R28 347 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 SDF2Q99470 211 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 P2RX4Q99571 388 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 PRPF18Q99633 342 aaKnown RBP2.94□□□□□ -1.94
HERC1-211ENST00000560983 NKX3-1Q99801 234 aaPredicted RBP2.94□□□□□ -1.94
HERC1-211ENST00000560983 NABP2Q9BQ15 211 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 EBPLQ9BY08 206 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 OR2J1Q9GZK6 312 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 RHOJQ9H4E5 214 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 ELOVL6Q9H5J4 265 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 RAB18Q9NP72 206 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 SIRT7Q9NRC8 400 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 CTSZQ9UBR2 303 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 IL19Q9UHD0 177 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 FBXL3Q9UKT7 428 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 NFU1Q9UMS0 254 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 RASD1Q9Y272 281 aa2.94□□□□□ -1.94
HERC1-211ENST00000560983 ZNF256Q9Y2P7 627 aaPredicted RBP2.94□□□□□ -1.94
HERC1-211ENST00000560983 A0A1B0GVI7 797 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 GNG14A0A1W2PPG7 69 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 FTCDNL1E5RQL4 147 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 AP3D1O14617 1153 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 LDLRAD4O15165 306 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 OR10H3O60404 316 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 GLRA3O75311 464 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 SLC22A3O75751 556 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 PAHP00439 452 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 KRT14P02533 472 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 PRSS2P07478 247 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 HCKP08631 526 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 ANXA4P09525 319 aaPredicted RBP2.93□□□□□ -1.94
HERC1-211ENST00000560983 NTSP30990 170 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 FRKP42685 505 aaPredicted RBP2.93□□□□□ -1.94
HERC1-211ENST00000560983 HTR3AP46098 478 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 NPY4RP50391 375 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 CCNG1P51959 295 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 POLR2HP52434 150 aaKnown RBP2.93□□□□□ -1.94
HERC1-211ENST00000560983 FRG1Q14331 258 aaKnown RBP2.93□□□□□ -1.94
HERC1-211ENST00000560983 LASP1Q14847 261 aaKnown RBP2.93□□□□□ -1.94
HERC1-211ENST00000560983 AANATQ16613 207 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 DCST2Q5T1A1 773 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 WBP2NLQ6ICG8 309 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 HCP5Q6MZN7 132 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 METTL2BQ6P1Q9 378 aaKnown RBP2.93□□□□□ -1.94
HERC1-211ENST00000560983 TTC27Q6P3X3 843 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 KCTD18Q6PI47 426 aaPredicted RBP2.93□□□□□ -1.94
HERC1-211ENST00000560983 WDR88Q6ZMY6 472 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 BTN2A1Q7KYR7 527 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 EIF3MQ7L2H7 374 aaKnown RBP2.93□□□□□ -1.94
HERC1-211ENST00000560983 OLIG3Q7RTU3 272 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 IGFN1Q86VF2 1251 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 C11orf42Q8N5U0 333 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 NEXN-AS1Q8NBZ9 246 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 ICA1LQ8NDH6 482 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 LY6G5BQ8NDX9 201 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 C19orf18Q8NEA5 215 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 OR2Z1Q8NG97 314 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 ATP6V1E2Q96A05 226 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 TUBGCP3Q96CW5 907 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 FAM120BQ96EK7 910 aaKnown RBP2.93□□□□□ -1.94
HERC1-211ENST00000560983 LRR1Q96L50 414 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 OR2V2Q96R30 315 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 SH3GL3Q99963 347 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 NAT9Q9BTE0 207 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 C1QTNF4Q9BXJ3 329 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 ACPTQ9BZG2 426 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 SLC19A3Q9BZV2 496 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 RNF121Q9H920 327 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 NMRAL1Q9HBL8 299 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 CDH20Q9HBT6 801 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 NMRK1Q9NWW6 199 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 ADPRHL2Q9NX46 363 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 IFNKQ9P0W0 207 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 POFUT2Q9Y2G5 429 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 KPTNQ9Y664 436 aa2.93□□□□□ -1.94
HERC1-211ENST00000560983 LOC100509620A0A075B734 347 aa2.92□□□□□ -1.94
HERC1-211ENST00000560983 LOC102725191A0A1B0GVB3 256 aa2.92□□□□□ -1.94
HERC1-211ENST00000560983 A6NDX4 124 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms