RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 BAG5Q9UL15 447 aa8.74□□□□□ -1.01
CDC42BPB-207ENST00000560492 GMEB1Q9Y692 573 aa8.74□□□□□ -1.01
CDC42BPB-207ENST00000560492 POMT1Q9Y6A1 747 aa8.74□□□□□ -1.01
CDC42BPB-207ENST00000560492 PRKDCP78527 4128 aaKnown RBP8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 BTBD17A6NE02 478 aa8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 P2RY10O00398 339 aa8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 FBP2O00757 339 aa8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 SCG5P05408 212 aa8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 CSF1P09603 554 aa8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 FPR3P25089 353 aa8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 KRTAP10-3P60369 221 aa8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 VMACQ2NL98 169 aa8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 LRRC23Q53EV4 343 aaPredicted RBP8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 OAFQ86UD1 273 aa8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 TMEM86BQ8N661 226 aa8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 LINC01006Q8NI28 216 aa8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 DYRK2Q92630 601 aa8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 LHX4Q969G2 390 aa8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 TPD52L3Q96J77 140 aa8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 HCAR1Q9BXC0 346 aa8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 UFSP2Q9NUQ7 469 aa8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 ACOXLQ9NUZ1 547 aa8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 ERVK-18Q9QC07 812 aa8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 HIF3AQ9Y2N7 669 aa8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 FAM96BQ9Y3D0 163 aa8.73□□□□□ -1.01
CDC42BPB-207ENST00000560492 EFCAB9A8MZ26 197 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 C22orf46C9J442 243 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 EDF1O60869 148 aaKnown RBP8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 IGHV4-59P01825 116 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 HLA-DPB1P04440 258 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 DBHP09172 617 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 CFHR2P36980 270 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 SLC9A3P48764 834 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 RGS6P49758 472 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 RAD23AP54725 363 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 RPL15P61313 204 aaKnown RBP8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 ST3GAL3Q11203 375 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 AQP6Q13520 282 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 OR8B8Q15620 311 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 CD276Q5ZPR3 534 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 DHRS7BQ6IAN0 325 aaPredicted RBP8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 FOXL2NBQ6ZUU3 175 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 PNLDC1Q8NA58 520 aaKnown RBP8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 OR13C2Q8NGS9 318 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 OR1F12Q8NHA8 337 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 LIPHQ8WWY8 451 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 LZICQ8WZA0 190 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 RASD2Q96D21 266 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 C7orf26Q96N11 449 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 ZNF570Q96NI8 536 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 ELAC2Q9BQ52 826 aaKnown RBP8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 ECSITQ9BQ95 431 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 WACQ9BTA9 647 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 POLR2J2Q9GZM3 115 aaKnown RBP8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 NDEL1Q9GZM8 345 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 POLR2J3Q9H1A7 115 aaKnown RBP8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 KAT8Q9H7Z6 458 aaKnown RBP8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 TMEM100Q9NV29 134 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 TMCC3Q9ULS5 477 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 ZNF281Q9Y2X9 895 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 CMYA5Q8N3K9 4069 aa8.72□□□□□ -1.01
CDC42BPB-207ENST00000560492 IGHV1-69DA0A0B4J2H0 117 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 CENPVL3A0A0U1RRI6 287 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 OR6C6A6NF89 314 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 ZNF879B4DU55 563 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 TNFRSF13BO14836 293 aaPredicted RBP8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 PIN1P1O15428 100 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 MLNRO43193 412 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 ADAM20O43506 726 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 FAM20BO75063 409 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 IGF2P01344 180 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 IFNA14P01570 189 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 IGHV1-69P01742 117 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 PRB2P02812 416 aaPredicted RBP8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 YAP1P46937 504 aaKnown RBP8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 NPY4RP50391 375 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 SF3A3Q12874 501 aaKnown RBP eCLIP8.71□□□□□ -1.021e-7■■■□□ 16.1
CDC42BPB-207ENST00000560492 KCNJ8Q15842 424 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 PRAMEF6Q5VXH4 476 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 SFRP4Q6FHJ7 346 aaPredicted RBP8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 GDPGP1Q6ZNW5 385 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 NRMQ8IXM6 262 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 PCYOX1LQ8NBM8 494 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 CCDC197Q8NCU1 140 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 LRTOMTQ8WZ04 291 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 APOBEC3DQ96AK3 386 aaPredicted RBP8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 WDFY2Q96P53 400 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 DPAGT1Q9H3H5 408 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 PRDM13Q9H4Q3 707 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 RHCGQ9UBD6 479 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 ADAM18Q9Y3Q7 739 aa8.71□□□□□ -1.02
CDC42BPB-207ENST00000560492 TEX13CA0A0J9YWL9 993 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 A0A0U1RQK1 487 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 ANKRD61A6NGH8 418 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 G3V4G9 280 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 RER1O15258 196 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 SLC16A7O60669 478 aa8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 KHDRBS3O75525 346 aaKnown RBP8.7□□□□□ -1.02
CDC42BPB-207ENST00000560492 CLPXO76031 633 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms