RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ZCCHC24Q8N2G6 241 aaKnown RBP11.65□□□□□ -0.54
SMAD3-214ENST00000560402 LNX2Q8N448 690 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 OR8D4Q8NGM9 314 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 OR13C2Q8NGS9 318 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 RDH5Q92781 318 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 TMEM54Q969K7 222 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 TXNDC15Q96J42 360 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 KLHL21Q9UJP4 597 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 DIMT1Q9UNQ2 313 aaKnown RBP11.65□□□□□ -0.54
SMAD3-214ENST00000560402 HAX1O00165 279 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 SERPINI2O75830 405 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 FARS2O95363 451 aaKnown RBP11.64□□□□□ -0.55
SMAD3-214ENST00000560402 HIST1H2ABP04908 130 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 SERPINA5P05154 406 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 OR8G3PP0DMU2 310 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 CD36P16671 472 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 MAKP20794 623 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 BIDP55957 195 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 MED22Q15528 200 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 ZNF74Q16587 644 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 MSMPQ1L6U9 139 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 ELFN2Q5R3F8 820 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 WDR88Q6ZMY6 472 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 SLC35D2Q76EJ3 337 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 HIST3H2AQ7L7L0 130 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 HDDC2Q7Z4H3 204 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 MEX3DQ86XN8 651 aaKnown RBP11.64□□□□□ -0.55
SMAD3-214ENST00000560402 PROKR2Q8NFJ6 384 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 HIST1H2ACQ93077 130 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 YIPF6Q96EC8 236 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 RNFT2Q96EX2 444 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 SYT3Q9BQG1 590 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 ZNF416Q9BWM5 594 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 NANSQ9NR45 359 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 MRPS18AQ9NVS2 196 aaKnown RBP11.64□□□□□ -0.55
SMAD3-214ENST00000560402 GLTPQ9NZD2 209 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 GPR160Q9UJ42 338 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 ZNF229Q9UJW7 825 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 SIGLEC7Q9Y286 467 aa11.64□□□□□ -0.55
SMAD3-214ENST00000560402 A0A0A6YYJ9 748 aa11.63□□□□□ -0.55
SMAD3-214ENST00000560402 A0A1W2PPW3 197 aa11.63□□□□□ -0.55
SMAD3-214ENST00000560402 SLC22A31A6NKX4 558 aa11.63□□□□□ -0.55
SMAD3-214ENST00000560402 LRRN3E7EW58 273 aa11.63□□□□□ -0.55
SMAD3-214ENST00000560402 PRR23D1E9PI22 279 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-214ENST00000560402 C11orf98E9PRG8 122 aa11.63□□□□□ -0.55
SMAD3-214ENST00000560402 CDC42EP2O14613 210 aa11.63□□□□□ -0.55
SMAD3-214ENST00000560402 IDH3BO43837 385 aa11.63□□□□□ -0.55
SMAD3-214ENST00000560402 OR7A10O76100 309 aa11.63□□□□□ -0.55
SMAD3-214ENST00000560402 PTHP01270 115 aa11.63□□□□□ -0.55
SMAD3-214ENST00000560402 LCKP06239 509 aa11.63□□□□□ -0.55
SMAD3-214ENST00000560402 PRR23D2P0DMB1 279 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-214ENST00000560402 C21orf33P30042 268 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-214ENST00000560402 HTR1FP30939 366 aa11.63□□□□□ -0.55
SMAD3-214ENST00000560402 RPL4P36578 427 aaKnown RBP11.63□□□□□ -0.55
SMAD3-214ENST00000560402 SELENOVP59797 346 aa11.63□□□□□ -0.55
SMAD3-214ENST00000560402 ARMCX4Q5H9R4 360 aa11.63□□□□□ -0.55
SMAD3-214ENST00000560402 LCN1P1Q5VSP4 162 aa11.63□□□□□ -0.55
SMAD3-214ENST00000560402 SLC22A24Q8N4F4 322 aa11.63□□□□□ -0.55
SMAD3-214ENST00000560402 TEX29Q8N6K0 151 aa11.63□□□□□ -0.55
SMAD3-214ENST00000560402 OR4Q3Q8NH05 313 aa11.63□□□□□ -0.55
SMAD3-214ENST00000560402 OTULINQ96BN8 352 aa11.63□□□□□ -0.55
SMAD3-214ENST00000560402 MRPL48Q96GC5 212 aaKnown RBP11.63□□□□□ -0.55
SMAD3-214ENST00000560402 SLC25A44Q96H78 314 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-214ENST00000560402 DCUN1D5Q9BTE7 237 aa11.63□□□□□ -0.55
SMAD3-214ENST00000560402 FGF20Q9NP95 211 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-214ENST00000560402 MEPEQ9NQ76 525 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-214ENST00000560402 CMC2Q9NRP2 79 aa11.63□□□□□ -0.55
SMAD3-214ENST00000560402 C20orf141Q9NUB4 165 aa11.63□□□□□ -0.55
SMAD3-214ENST00000560402 TMEM38BQ9NVV0 291 aa11.63□□□□□ -0.55
SMAD3-214ENST00000560402 CENPBD1B2RD01 187 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 CCRL2O00421 344 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 DHHO43323 396 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 RNF13O43567 381 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 CH25HO95992 272 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 IGHG1P01857 330 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 HSMCR30P0CW71 290 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 PGA4P0DJD7 388 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 PGA3P0DJD8 388 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 FUT1P19526 365 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 ALDH3B1P43353 468 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 TMEM33P57088 247 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 EFNB1P98172 346 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 POU4F2Q12837 409 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 SPHARQ15513 63 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 DGUOKQ16854 277 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 RGS7BPQ6MZT1 257 aaPredicted RBP11.62□□□□□ -0.55
SMAD3-214ENST00000560402 TMEM53Q6P2H8 277 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 DPY19L2P2Q6ZN68 376 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 NANOGNBQ7Z5D8 188 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 ZNF584Q8IVC4 421 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 WDFY1Q8IWB7 410 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 SLC30A7Q8NEW0 376 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 OR52I1Q8NGK6 324 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 OR51A7Q8NH64 312 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 CLDND2Q8NHS1 167 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 SNX33Q8WV41 574 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 MGLLQ99685 303 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 CDH20Q9HBT6 801 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 INPP5EQ9NRR6 644 aa11.62□□□□□ -0.55
SMAD3-214ENST00000560402 GRIP1Q9Y3R0 1128 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms