RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 GALP22466 123 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 HTR5AP47898 357 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 CX3CR1P49238 355 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 TUBA1BP68363 451 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 GALK2Q01415 458 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 FABP5Q01469 135 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 GSG1Q2KHT4 349 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 STAC2Q6ZMT1 411 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 TUBA1AQ71U36 451 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 BHLHA15Q7RTS1 189 aaPredicted RBP10.62□□□□□ -0.71
HERC1-205ENST00000559886 C17orf78Q8N4C9 275 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 RELL2Q8NC24 303 aaPredicted RBP10.62□□□□□ -0.71
HERC1-205ENST00000559886 OR5AK2Q8NH90 309 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 SLC7A6Q92536 515 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 SPTSSAQ969W0 71 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 PPP1R14AQ96A00 147 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 TRMT61AQ96FX7 289 aaKnown RBP10.62□□□□□ -0.71
HERC1-205ENST00000559886 OR52A1Q9UKL2 312 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 SSR3Q9UNL2 185 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 SLC22A13Q9Y226 551 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 ZNF281Q9Y2X9 895 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 LOC100506127A0A0U1RQW1 187 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 TRDV1A0A1B0GX56 115 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 EEF1E1-BLOC1S5C9J1V9 151 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 F5H5K5 113 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 EEF1E1O43324 174 aaKnown RBP10.62□□□□□ -0.71
HERC1-205ENST00000559886 APOC1P02654 83 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 DBHP09172 617 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 COX5BP10606 129 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 PSMB1P20618 241 aaKnown RBP10.62□□□□□ -0.71
HERC1-205ENST00000559886 ZNF121P58317 390 aaPredicted RBP10.62□□□□□ -0.71
HERC1-205ENST00000559886 UBE2NP61088 152 aaKnown RBP10.62□□□□□ -0.71
HERC1-205ENST00000559886 RPS11P62280 158 aaKnown RBP eCLIP10.62□□□□□ -0.71
HERC1-205ENST00000559886 LSM3P62310 102 aaKnown RBP10.62□□□□□ -0.71
HERC1-205ENST00000559886 SOWAHCQ53LP3 525 aaPredicted RBP10.62□□□□□ -0.71
HERC1-205ENST00000559886 TMEM91Q6ZNR0 172 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 PRSS45Q7RTY3 260 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 ZNF283Q8N7M2 679 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 GALNT11Q8NCW6 608 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 ABHD4Q8TB40 342 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 ZNF75AQ96N20 296 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 BBC3Q96PG8 261 aaPredicted RBP10.62□□□□□ -0.71
HERC1-205ENST00000559886 DCLRE1CQ96SD1 692 aaKnown RBP10.62□□□□□ -0.71
HERC1-205ENST00000559886 CENPOQ9BU64 300 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 HDHD5Q9BXW7 423 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 MOB1AQ9H8S9 216 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 SLC17A5Q9NRA2 495 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 NUFIP1Q9UHK0 495 aaKnown RBP10.62□□□□□ -0.71
HERC1-205ENST00000559886 GTF2A1LQ9UNN4 478 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 PRR14LQ5THK1 2151 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 ZFYVE26Q68DK2 2539 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 CFAP46Q8IYW2 2715 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 TRIM64BA6NI03 449 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 ACOD1A6NK06 481 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 M0R135 149 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 SC5DO75845 299 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 FGF9P31371 208 aaPredicted RBP10.61□□□□□ -0.71
HERC1-205ENST00000559886 VBP1P61758 197 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 NCS1P62166 190 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 YIF1BQ5BJH7 314 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 BCL2L15Q5TBC7 163 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 MDP1Q86V88 176 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 ZNF676Q8N7Q3 588 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 WDR31Q8NA23 367 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 RGP1Q92546 391 aaPredicted RBP10.61□□□□□ -0.71
HERC1-205ENST00000559886 ZNF799Q96GE5 643 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 PBOV1Q9GZY1 135 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 COMMD4Q9H0A8 199 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 EXOSC4Q9NPD3 245 aaKnown RBP10.61□□□□□ -0.71
HERC1-205ENST00000559886 BRD7Q9NPI1 651 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 TXNL4BQ9NX01 149 aaKnown RBP10.61□□□□□ -0.71
HERC1-205ENST00000559886 DIDO1Q9BTC0 2240 aaKnown RBP10.61□□□□□ -0.71
HERC1-205ENST00000559886 HIVEP3Q5T1R4 2406 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 GABRPO00591 440 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 RGS9O75916 674 aaPredicted RBP10.61□□□□□ -0.71
HERC1-205ENST00000559886 APEX1P27695 318 aaKnown RBP10.61□□□□□ -0.71
HERC1-205ENST00000559886 TPTEP56180 551 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 PLP2Q04941 152 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 INSL4Q14641 139 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 DRAM2Q6UX65 266 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 NAA40Q86UY6 237 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 ZNF584Q8IVC4 421 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 ELMOD2Q8IZ81 293 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 OBP2BQ9NPH6 170 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 ELOVL5Q9NYP7 299 aa10.61□□□□□ -0.71
HERC1-205ENST00000559886 OR5H1A6NKK0 313 aa10.6□□□□□ -0.71
HERC1-205ENST00000559886 SLC22A1O15245 554 aa10.6□□□□□ -0.71
HERC1-205ENST00000559886 ATE1O95260 518 aa10.6□□□□□ -0.71
HERC1-205ENST00000559886 SERPINA3P01011 423 aa10.6□□□□□ -0.71
HERC1-205ENST00000559886 TTRP02766 147 aa10.6□□□□□ -0.71
HERC1-205ENST00000559886 ISG15P05161 165 aa10.6□□□□□ -0.71
HERC1-205ENST00000559886 ACSM4P0C7M7 580 aa10.6□□□□□ -0.71
HERC1-205ENST00000559886 SLC2A1P11166 492 aa10.6□□□□□ -0.71
HERC1-205ENST00000559886 IL32P24001 234 aa10.6□□□□□ -0.71
HERC1-205ENST00000559886 HOXC12P31275 282 aa10.6□□□□□ -0.71
HERC1-205ENST00000559886 TLE1Q04724 770 aa10.6□□□□□ -0.71
HERC1-205ENST00000559886 ZNF704Q6ZNC4 412 aaPredicted RBP10.6□□□□□ -0.71
HERC1-205ENST00000559886 RDH10Q8IZV5 341 aa10.6□□□□□ -0.71
HERC1-205ENST00000559886 OR13C5Q8NGS8 318 aa10.6□□□□□ -0.71
HERC1-205ENST00000559886 RNF167Q9H6Y7 350 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms