RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, human

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNB4-204	ENST00000559849		F5H5K5	113 aa		11.7	□□□□□ -0.54
CHRNB4-204	ENST00000559849	MT-ND5	P03915	603 aa		11.7	□□□□□ -0.54
CHRNB4-204	ENST00000559849	SPARC	P09486	303 aa		11.7	□□□□□ -0.54
CHRNB4-204	ENST00000559849	INHBB	P09529	407 aa		11.7	□□□□□ -0.54
CHRNB4-204	ENST00000559849	CSF3	P09919	207 aa		11.7	□□□□□ -0.54
CHRNB4-204	ENST00000559849	PEX2	P28328	305 aa		11.7	□□□□□ -0.54
CHRNB4-204	ENST00000559849	EPHA2	P29317	976 aa		11.7	□□□□□ -0.54
CHRNB4-204	ENST00000559849	GSTT1	P30711	240 aa		11.7	□□□□□ -0.54
CHRNB4-204	ENST00000559849	LRRC36	Q1X8D7	754 aa		11.7	□□□□□ -0.54
CHRNB4-204	ENST00000559849	KLHL12	Q53G59	568 aa		11.7	□□□□□ -0.54
CHRNB4-204	ENST00000559849	SLC35D3	Q5M8T2	416 aa		11.7	□□□□□ -0.54
CHRNB4-204	ENST00000559849	CXXC5	Q7LFL8	322 aa	Known RBP	11.7	□□□□□ -0.54
CHRNB4-204	ENST00000559849	CIART	Q8N365	385 aa	Predicted RBP	11.7	□□□□□ -0.54
CHRNB4-204	ENST00000559849	FAM168A	Q92567	244 aa		11.7	□□□□□ -0.54
CHRNB4-204	ENST00000559849	APOBEC3D	Q96AK3	386 aa	Predicted RBP	11.7	□□□□□ -0.54
CHRNB4-204	ENST00000559849	INTS14	Q96SY0	518 aa		11.7	□□□□□ -0.54
CHRNB4-204	ENST00000559849	VCX3B	Q9H321	246 aa		11.7	□□□□□ -0.54
CHRNB4-204	ENST00000559849	MARCH7	Q9H992	704 aa		11.7	□□□□□ -0.54
CHRNB4-204	ENST00000559849	NAT2	P11245	290 aa		11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	MPV17	P39210	176 aa		11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	KRTAP27-1	Q3LI81	207 aa		11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	SLX4IP	Q5VYV7	408 aa		11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	SHF	Q7M4L6	423 aa		11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	DPY19L4	Q7Z388	723 aa		11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ERI1	Q8IV48	349 aa	Known RBP	11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	OR6N2	Q8NGY6	317 aa		11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	SPTSSA	Q969W0	71 aa		11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	COX4I2	Q96KJ9	171 aa		11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	TPK1	Q9H3S4	243 aa		11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	DDX28	Q9NUL7	540 aa	Known RBP	11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	PLSCR5	A0PG75	271 aa		11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	C17orf100	A8MU93	164 aa		11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	LIPA	P38571	399 aa		11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	PDLIM4	P50479	330 aa		11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	TPTE	P56180	551 aa		11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	RPS7	P62081	194 aa	Known RBP	11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ALKBH6	Q3KRA9	238 aa		11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	COLCA1	Q6ZS62	124 aa		11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	TIGD4	Q8IY51	512 aa		11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	OR10S1	Q8NGN2	331 aa		11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	C1QTNF5	Q9BXJ0	243 aa		11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	REG4	Q9BYZ8	158 aa		11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	CGGBP1	Q9UFW8	167 aa	Predicted RBP	11.69	□□□□□ -0.54
CHRNB4-204	ENST00000559849	IGHV4-30-2	A0A087WSY4	118 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	LOC390937	A0A1W2PQ73	354 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	NDUFS8	O00217	210 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	TLX2	O43763	284 aa	Predicted RBP	11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ALPL	P05186	524 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ACSM4	P0C7M7	580 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	PSKH1	P11801	424 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	DAO	P14920	347 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	SLC15A1	P46059	708 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	EFNB1	P98172	346 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	PSG7	Q13046	419 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	OGFRL1	Q5TC84	451 aa	Predicted RBP	11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	IZUMO2	Q6UXV1	221 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	RHOU	Q7L0Q8	258 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	BIVM	Q86UB2	503 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	BBS1	Q8NFJ9	593 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ST7L	Q8TDW4	575 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	C10orf105	Q8TEF2	133 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	SLAMF6	Q96DU3	332 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ZMYND19	Q96E35	227 aa	Predicted RBP	11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	TEAD3	Q99594	435 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ZNF184	Q99676	751 aa	Predicted RBP	11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	GABARAPL3	Q9BY60	117 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	CYSLTR2	Q9NS75	346 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	CENPM	Q9NSP4	180 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	LRCH1	Q9Y2L9	728 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ORC6	Q9Y5N6	252 aa		11.68	□□□□□ -0.54
CHRNB4-204	ENST00000559849	RNF223	E7ERA6	249 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	SMAD7	O15105	426 aa	Known RBP	11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	PRKY	O43930	277 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	SLC2A5	P22732	501 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	OTX1	P32242	354 aa	Predicted RBP	11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	POLR2I	P36954	125 aa	Known RBP	11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ZNF81	P51508	661 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	MMP15	P51511	669 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	APOF	Q13790	326 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	EIF2B1	Q14232	305 aa	Known RBP	11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	TAF13	Q15543	124 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	PCGF3	Q3KNV8	242 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	C12orf73	Q69YU5	71 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	TCEANC	Q8N8B7	351 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	UBASH3B	Q8TF42	649 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	HAVCR1	Q96D42	359 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	CMBL	Q96DG6	245 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	NKIRAS2	Q9NYR9	191 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	USE1	Q9NZ43	259 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	H2AFY2	Q9P0M6	372 aa	Predicted RBP	11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ABCA1	O95477	2261 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	NIPBL	Q6KC79	2804 aa	eCLIP	11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ZNF878	C9JN71	531 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849		M0R135	149 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	EI24	O14681	340 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	LCAT	P04180	440 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	RAC2	P15153	192 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	SLC25A16	P16260	332 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	ALDH3A2	P51648	485 aa		11.67	□□□□□ -0.54
CHRNB4-204	ENST00000559849	RAD23A	P54725	363 aa		11.67	□□□□□ -0.54

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