RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 BSNQ9UPA5 3926 aa15.72■□□□□ 0.11
SNX1-208ENST00000559844 A0A0J9YW62 118 aa15.72■□□□□ 0.11
SNX1-208ENST00000559844 LRRC3CA6NJW4 275 aa15.72■□□□□ 0.11
SNX1-208ENST00000559844 ZNF878C9JN71 531 aa15.72■□□□□ 0.11
SNX1-208ENST00000559844 EIF1AYO14602 144 aaKnown RBP15.72■□□□□ 0.11
SNX1-208ENST00000559844 KLK2P20151 261 aa15.72■□□□□ 0.11
SNX1-208ENST00000559844 MNDAP41218 407 aa15.72■□□□□ 0.11
SNX1-208ENST00000559844 CSNK1A1P48729 337 aa15.72■□□□□ 0.11
SNX1-208ENST00000559844 MRPS10P82664 201 aaKnown RBP15.72■□□□□ 0.11
SNX1-208ENST00000559844 PMP22Q01453 160 aa15.72■□□□□ 0.11
SNX1-208ENST00000559844 FOXO1Q12778 655 aa15.72■□□□□ 0.11
SNX1-208ENST00000559844 ESPNLQ6ZVH7 1005 aa15.72■□□□□ 0.11
SNX1-208ENST00000559844 DNAAF1Q8NEP3 725 aa15.72■□□□□ 0.11
SNX1-208ENST00000559844 OR13C3Q8NGS6 347 aa15.72■□□□□ 0.11
SNX1-208ENST00000559844 SMIM4Q8WVI0 70 aa15.72■□□□□ 0.11
SNX1-208ENST00000559844 TMEM54Q969K7 222 aa15.72■□□□□ 0.11
SNX1-208ENST00000559844 HAVCR1Q96D42 359 aa15.72■□□□□ 0.11
SNX1-208ENST00000559844 MOB1AQ9H8S9 216 aa15.72■□□□□ 0.11
SNX1-208ENST00000559844 ZFP64Q9NPA5 681 aa15.72■□□□□ 0.11
SNX1-208ENST00000559844 FAM206AQ9NX38 181 aa15.72■□□□□ 0.11
SNX1-208ENST00000559844 NLKQ9UBE8 527 aa15.72■□□□□ 0.11
SNX1-208ENST00000559844 LHFPL6Q9Y693 200 aa15.72■□□□□ 0.11
SNX1-208ENST00000559844 SPTA1P02549 2419 aa15.72■□□□□ 0.11
SNX1-208ENST00000559844 LOC107986453A0A1B0GWG9 222 aa15.71■□□□□ 0.11
SNX1-208ENST00000559844 MEGF11A6BM72 1044 aa15.71■□□□□ 0.11
SNX1-208ENST00000559844 HMX3A6NHT5 357 aa15.71■□□□□ 0.11
SNX1-208ENST00000559844 H3BSH0 61 aa15.71■□□□□ 0.11
SNX1-208ENST00000559844 TNFSF11O14788 317 aa15.71■□□□□ 0.11
SNX1-208ENST00000559844 CCNKO75909 580 aa15.71■□□□□ 0.11
SNX1-208ENST00000559844 GUCA1AP43080 201 aaPredicted RBP15.71■□□□□ 0.11
SNX1-208ENST00000559844 EIF1AXP47813 144 aaKnown RBP15.71■□□□□ 0.11
SNX1-208ENST00000559844 ZNF133P52736 654 aaPredicted RBP15.71■□□□□ 0.11
SNX1-208ENST00000559844 RAC3P60763 192 aa15.71■□□□□ 0.11
SNX1-208ENST00000559844 PLGLB1Q02325 96 aa15.71■□□□□ 0.11
SNX1-208ENST00000559844 GLT8D1Q68CQ7 371 aa15.71■□□□□ 0.11
SNX1-208ENST00000559844 ZFP62Q8NB50 900 aaPredicted RBP15.71■□□□□ 0.11
SNX1-208ENST00000559844 OR9K2Q8NGE7 335 aa15.71■□□□□ 0.11
SNX1-208ENST00000559844 OR6N1Q8NGY5 312 aa15.71■□□□□ 0.11
SNX1-208ENST00000559844 TTTY12Q9BZ98 90 aa15.71■□□□□ 0.11
SNX1-208ENST00000559844 EMC7Q9NPA0 242 aa15.71■□□□□ 0.11
SNX1-208ENST00000559844 ORC5O43913 435 aa15.71■□□□□ 0.1
SNX1-208ENST00000559844 IGFBP3P17936 291 aaPredicted RBP15.71■□□□□ 0.1
SNX1-208ENST00000559844 DGCR2P98153 550 aa15.71■□□□□ 0.1
SNX1-208ENST00000559844 C10orf128Q5T292 105 aa15.71■□□□□ 0.1
SNX1-208ENST00000559844 LINGO2Q7L985 606 aa15.71■□□□□ 0.1
SNX1-208ENST00000559844 KRT74Q7RTS7 529 aa15.71■□□□□ 0.1
SNX1-208ENST00000559844 YRDCQ86U90 279 aaKnown RBP15.71■□□□□ 0.1
SNX1-208ENST00000559844 CREB3L1Q96BA8 519 aa15.71■□□□□ 0.1
SNX1-208ENST00000559844 OR2M2Q96R28 347 aa15.71■□□□□ 0.1
SNX1-208ENST00000559844 MARVELD1Q9BSK0 173 aa15.71■□□□□ 0.1
SNX1-208ENST00000559844 OR2B2Q9GZK3 357 aa15.71■□□□□ 0.1
SNX1-208ENST00000559844 SLC17A2O00624 439 aa15.7■□□□□ 0.1
SNX1-208ENST00000559844 CD3GP09693 182 aa15.7■□□□□ 0.1
SNX1-208ENST00000559844 RFPL3SP0C7P2 107 aa15.7■□□□□ 0.1
SNX1-208ENST00000559844 ENPP1P22413 925 aa15.7■□□□□ 0.1
SNX1-208ENST00000559844 HLA-DMAP28067 261 aa15.7■□□□□ 0.1
SNX1-208ENST00000559844 HSD11B1P28845 292 aa15.7■□□□□ 0.1
SNX1-208ENST00000559844 SLC6A1P30531 599 aa15.7■□□□□ 0.1
SNX1-208ENST00000559844 LSM6P62312 80 aaKnown RBP15.7■□□□□ 0.1
SNX1-208ENST00000559844 TAF13Q15543 124 aa15.7■□□□□ 0.1
SNX1-208ENST00000559844 RAB11BQ15907 218 aa15.7■□□□□ 0.1
SNX1-208ENST00000559844 SLC36A2Q495M3 483 aa15.7■□□□□ 0.1
SNX1-208ENST00000559844 TMEM69Q5SWH9 247 aa15.7■□□□□ 0.1
SNX1-208ENST00000559844 ELMOD2Q8IZ81 293 aa15.7■□□□□ 0.1
SNX1-208ENST00000559844 WBP1Q96G27 269 aa15.7■□□□□ 0.1
SNX1-208ENST00000559844 SFXN2Q96NB2 322 aa15.7■□□□□ 0.1
SNX1-208ENST00000559844 PLEKHA1Q9HB21 404 aa15.7■□□□□ 0.1
SNX1-208ENST00000559844 B4GALT7Q9UBV7 327 aa15.7■□□□□ 0.1
SNX1-208ENST00000559844 PRRC2CQ9Y520 2896 aaKnown RBP15.69■□□□□ 0.1
SNX1-208ENST00000559844 IGHV3-15A0A0B4J1V0 119 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 FAM166BA8MTA8 275 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 LINC01387J3KSC0 135 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 CDAP32320 146 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 SUCLG1P53597 346 aaKnown RBP15.69■□□□□ 0.1
SNX1-208ENST00000559844 PSMA6P60900 246 aaKnown RBP15.69■□□□□ 0.1
SNX1-208ENST00000559844 KLRB1Q12918 225 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 DYRK1AQ13627 763 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 CFAP77Q6ZQR2 320 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 FOXL2NBQ6ZUU3 175 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 IZUMO1Q8IYV9 350 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 Q8NA96 180 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 OR10S1Q8NGN2 331 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 UCN2Q96RP3 112 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 PBOV1Q9GZY1 135 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 TAS2R4Q9NYW5 299 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 ZNF407Q9C0G0 2248 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 GABARAPH6UMI1 98 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 GDF1P27539 372 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 RPUSD3Q6P087 351 aaKnown RBP15.69■□□□□ 0.1
SNX1-208ENST00000559844 ZNF385AQ96PM9 386 aaKnown RBP15.69■□□□□ 0.1
SNX1-208ENST00000559844 TAAR6Q96RI8 345 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 SRXN1Q9BYN0 137 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 DPAGT1Q9H3H5 408 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 ZNF703Q9H7S9 590 aaPredicted RBP15.69■□□□□ 0.1
SNX1-208ENST00000559844 SLC17A5Q9NRA2 495 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 ZNF221Q9UK13 617 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 DNAJC13O75165 2243 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 SVILO95425 2214 aa15.69■□□□□ 0.1
SNX1-208ENST00000559844 MED12Q93074 2177 aa15.68■□□□□ 0.1
SNX1-208ENST00000559844 ACOT7O00154 380 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms