RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 ZNF169Q14929 603 aaPredicted RBP11.14□□□□□ -0.63
USP3-213ENST00000559711 HES5Q5TA89 166 aa11.14□□□□□ -0.63
USP3-213ENST00000559711 ZNF627Q7L945 461 aa11.14□□□□□ -0.63
USP3-213ENST00000559711 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.14□□□□□ -0.63
USP3-213ENST00000559711 SIAH3Q8IW03 269 aa11.14□□□□□ -0.63
USP3-213ENST00000559711 MCEMP1Q8IX19 187 aa11.14□□□□□ -0.63
USP3-213ENST00000559711 ZNF283Q8N7M2 679 aa11.14□□□□□ -0.63
USP3-213ENST00000559711 POC5Q8NA72 575 aa11.14□□□□□ -0.63
USP3-213ENST00000559711 OR4M1Q8NGD0 313 aa11.14□□□□□ -0.63
USP3-213ENST00000559711 OR8B12Q8NGG6 310 aa11.14□□□□□ -0.63
USP3-213ENST00000559711 SETD6Q8TBK2 473 aa11.14□□□□□ -0.63
USP3-213ENST00000559711 SP140LQ9H930 580 aa11.14□□□□□ -0.63
USP3-213ENST00000559711 ZNF319Q9P2F9 582 aa11.14□□□□□ -0.63
USP3-213ENST00000559711 KIAA1549Q9HCM3 1950 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 MEGF11A6BM72 1044 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 SLC22A20A6NK97 555 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 LOC400499M0QZD8 3231 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 SYT7O43581 403 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 SYNGR3O43761 229 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 KRT33AO76009 404 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 TGM6O95932 706 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 B4GALT1P15291 398 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 CRYGSP22914 178 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 DEFA1P59665 94 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 DEFA3P59666 94 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 PCBD1P61457 104 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 GALK2Q01415 458 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 SCRN3Q0VDG4 424 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 RAB35Q15286 201 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 Q6ZS92 163 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 DNAAF1Q8NEP3 725 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 OR51E1Q8TCB6 317 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 LGALS14Q8TCE9 139 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 APH1AQ96BI3 265 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 HDHD2Q9H0R4 259 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 LIN7BQ9HAP6 207 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 SLC17A5Q9NRA2 495 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 PLEK2Q9NYT0 353 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 MALT1Q9UDY8 824 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 OR5V1Q9UGF6 321 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 CLEC4AQ9UMR7 237 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 MSRB2Q9Y3D2 182 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 TIMM10BQ9Y5J6 103 aa11.13□□□□□ -0.63
USP3-213ENST00000559711 CFAP47Q6ZTR5 3102 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 A0A1B0GVI7 797 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 OR6C6A6NF89 314 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 SGCEO43556 437 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 WISP2O76076 250 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 PTTG1O95997 202 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 IGLV3-1P01715 115 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 HLA-DQB1P01920 261 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 SLC2A1P11166 492 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 FCGR2AP12318 317 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 PITPNBP48739 271 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 SCN1BQ07699 218 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 KRTAP27-1Q3LI81 207 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 UBE2NLQ5JXB2 153 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 FAM166AQ6J272 317 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 ZNF813Q6ZN06 617 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 FAM57BQ71RH2 274 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 NUFIP2Q7Z417 695 aaKnown RBP11.12□□□□□ -0.63
USP3-213ENST00000559711 LUZP2Q86TE4 346 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 SKA3Q8IX90 412 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 Q8N402 240 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 SPTSSAQ969W0 71 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 FGGYQ96C11 551 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 TAAR6Q96RI8 345 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 ABCG5Q9H222 651 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 FAIMQ9NVQ4 179 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 TAS2R4Q9NYW5 299 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 STEAP1Q9UHE8 339 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 TBC1D24Q9ULP9 559 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 ETV7Q9Y603 341 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 ZNF407Q9C0G0 2248 aa11.12□□□□□ -0.63
USP3-213ENST00000559711 A0A0G2JMP0 313 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 A0A0U1RQV5 110 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 A0A0X1KG70 313 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 A0A1W2PQ09 198 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 ZNF587BE7ETH6 402 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 F5H5K5 113 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 M0R135 149 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 SLC17A2O00624 439 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 MAGEB3O15480 346 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 LMX1BO60663 402 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 FARS2O95363 451 aaKnown RBP11.11□□□□□ -0.63
USP3-213ENST00000559711 IGHV3-9P01782 118 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 MMP7P09237 267 aaPredicted RBP11.11□□□□□ -0.63
USP3-213ENST00000559711 ZNF32P17041 273 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 ANOS1P23352 680 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 DDOSTP39656 456 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 NR4A2P43354 598 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 CLDN12P56749 244 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 ARF1P84077 181 aaKnown RBP11.11□□□□□ -0.63
USP3-213ENST00000559711 PSG4Q00888 419 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 GLT8D1Q68CQ7 371 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 PYHIN1Q6K0P9 492 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 ZNF529Q6P280 563 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 Q6ZSR3 168 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 SLC16A14Q7RTX9 510 aa11.11□□□□□ -0.63
USP3-213ENST00000559711 NAA40Q86UY6 237 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms