RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 GJC3Q8NFK1 279 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 OR8B3Q8NGG8 313 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 TAF15Q92804 592 aaKnown RBP eCLIP10.93□□□□□ -0.66
TPM1-220ENST00000559556 TMIGD2Q96BF3 282 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 RCN3Q96D15 328 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 FAM46AQ96IP4 442 aaKnown RBP10.93□□□□□ -0.66
TPM1-220ENST00000559556 HSH2DQ96JZ2 352 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 ZNF582Q96NG8 517 aaPredicted RBP10.93□□□□□ -0.66
TPM1-220ENST00000559556 OR8B2Q96RD0 313 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 NUAK2Q9H093 628 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 SOX21Q9Y651 276 aaPredicted RBP10.93□□□□□ -0.66
TPM1-220ENST00000559556 LHFPL6Q9Y693 200 aa10.93□□□□□ -0.66
TPM1-220ENST00000559556 KIR2DS1A0A191URI9 304 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 MDFIC2A0A1B0GVS7 189 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 LRRC30A6NM36 301 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 F5H5P2 479 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 CXCR6O00574 342 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 NME4O00746 187 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 SOCS2O14508 198 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 SLC22A2O15244 555 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 PTP4A3O75365 173 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 GPANK1O95872 356 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 FXYD6P3P58550 94 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 DEFA6Q01524 100 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 COX10Q12887 443 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 DCDC5Q6ZRR9 648 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 COLCA1Q6ZS62 124 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 RRM2BQ7LG56 351 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 TSEN54Q7Z6J9 526 aaKnown RBP10.92□□□□□ -0.66
TPM1-220ENST00000559556 JAZF1Q86VZ6 243 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 FITM2Q8N6M3 262 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 Q8TCH9 128 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 WFDC12Q8WWY7 111 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 NUDT16L1Q9BRJ7 211 aaKnown RBP10.92□□□□□ -0.66
TPM1-220ENST00000559556 RERGLQ9H628 205 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 FGFR1OP2Q9NVK5 253 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 CLN8Q9UBY8 286 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 POLR1DQ9Y2S0 133 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 CAPN7Q9Y6W3 813 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 ENPP4Q9Y6X5 453 aa10.92□□□□□ -0.66
TPM1-220ENST00000559556 DNAH3Q8TD57 4116 aa10.91□□□□□ -0.66
TPM1-220ENST00000559556 IGLV1-36A0A0B4J1U3 117 aa10.91□□□□□ -0.66
TPM1-220ENST00000559556 A0A1B0GUS0 222 aa10.91□□□□□ -0.66
TPM1-220ENST00000559556 A0A1W2PRQ8 180 aa10.91□□□□□ -0.66
TPM1-220ENST00000559556 SRRM5B3KS81 715 aa10.91□□□□□ -0.66
TPM1-220ENST00000559556 DCTN6O00399 190 aa10.91□□□□□ -0.66
TPM1-220ENST00000559556 HOXA3O43365 443 aaPredicted RBP10.91□□□□□ -0.66
TPM1-220ENST00000559556 TXNDC12O95881 172 aa10.91□□□□□ -0.66
TPM1-220ENST00000559556 PSMB10P40306 273 aa10.91□□□□□ -0.66
TPM1-220ENST00000559556 BPIFB3P59826 476 aa10.91□□□□□ -0.66
TPM1-220ENST00000559556 LIPEQ05469 1076 aa10.91□□□□□ -0.66
TPM1-220ENST00000559556 DGCR6Q14129 220 aa10.91□□□□□ -0.66
TPM1-220ENST00000559556 RSPO1Q2MKA7 263 aaPredicted RBP10.91□□□□□ -0.66
TPM1-220ENST00000559556 DEFB112Q30KQ8 113 aa10.91□□□□□ -0.66
TPM1-220ENST00000559556 KRTAP27-1Q3LI81 207 aa10.91□□□□□ -0.66
TPM1-220ENST00000559556 FAM201AQ5SY85 155 aa10.91□□□□□ -0.66
TPM1-220ENST00000559556 WDR25Q64LD2 544 aaPredicted RBP10.91□□□□□ -0.66
TPM1-220ENST00000559556 BRD3OSQ6XYD6 125 aa10.91□□□□□ -0.66
TPM1-220ENST00000559556 ZNF841Q6ZN19 808 aa10.91□□□□□ -0.66
TPM1-220ENST00000559556 CYP4Z1Q86W10 505 aa10.91□□□□□ -0.66
TPM1-220ENST00000559556 CELF2-AS1Q8N7Q2 184 aa10.91□□□□□ -0.66
TPM1-220ENST00000559556 OR10S1Q8NGN2 331 aa10.91□□□□□ -0.66
TPM1-220ENST00000559556 RSRC1Q96IZ7 334 aaKnown RBP10.91□□□□□ -0.66
TPM1-220ENST00000559556 IGHV3-64DA0A0J9YX35 117 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 FAM181BA6NEQ2 426 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 ENSAO43768 121 aaKnown RBP10.9□□□□□ -0.66
TPM1-220ENST00000559556 SERPINA1P01009 418 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 HLA-DPB1P04440 258 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 H1F0P07305 194 aaKnown RBP10.9□□□□□ -0.66
TPM1-220ENST00000559556 SELEP16581 610 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 OMGP23515 440 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 FPR3P25089 353 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 CRABP1P29762 137 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 PMELP40967 661 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 CD200P41217 278 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 CDKN2AP42771 156 aaKnown RBP10.9□□□□□ -0.66
TPM1-220ENST00000559556 OMPP47874 163 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 RAD23AP54725 363 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 FGF12P61328 243 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 MAB21L1Q13394 359 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 GK2Q14410 553 aaPredicted RBP10.9□□□□□ -0.66
TPM1-220ENST00000559556 MEP1BQ16820 701 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 FGD3Q5JSP0 725 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 CLEC12AQ5QGZ9 265 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 ZNF362Q5T0B9 420 aaPredicted RBP10.9□□□□□ -0.66
TPM1-220ENST00000559556 GPR157Q5UAW9 335 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 C8orf82Q6P1X6 216 aaPredicted RBP10.9□□□□□ -0.66
TPM1-220ENST00000559556 DNM1P34Q6PK57 102 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 LYPD2Q6UXB3 125 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 DPY19L2P2Q6ZN68 376 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 FKBP9P1Q75LS8 142 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 SLC26A10Q8NG04 563 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 ERGIC1Q969X5 290 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 TSSK2Q96PF2 358 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 CDADC1Q9BWV3 514 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 HCAR1Q9BXC0 346 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 WDR76Q9H967 626 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 TMEM100Q9NV29 134 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 RPS6KA6Q9UK32 745 aa10.9□□□□□ -0.66
TPM1-220ENST00000559556 IER3IP1Q9Y5U9 82 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms