RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 MRPS14O60783 128 aaKnown RBP12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 CTAG2O75638 210 aa12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 IGLV3-1P01715 115 aa12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 NR4A1P22736 598 aa12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 APLNRP35414 380 aa12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 ETV1P50549 477 aa12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 MMP16P51512 607 aa12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 DOC2BQ14184 412 aa12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 TBC1D28Q2M2D7 210 aa12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 FDX2Q6P4F2 183 aa12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 TMEM154Q6P9G4 183 aa12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 DRAM2Q6UX65 266 aa12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 KCTD20Q7Z5Y7 419 aa12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 ZNF101Q8IZC7 436 aa12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 ZNF540Q8NDQ6 660 aa12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 OR10H4Q8NGA5 316 aa12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 OR1J2Q8NGS2 313 aa12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 COPS4Q9BT78 406 aa12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 SCN3BQ9NY72 215 aa12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 LSM2Q9Y333 95 aaKnown RBP12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 EXOSC1Q9Y3B2 195 aaKnown RBP12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 TPRKBQ9Y3C4 175 aa12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 ANKRD17O75179 2603 aaKnown RBP12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 PLCE1Q9P212 2302 aa12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 HEATR1Q9H583 2144 aaKnown RBP12.77□□□□□ -0.36
SNRPA1-207ENST00000559309 C5orf49A4QMS7 147 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 METTL15A6NJ78 407 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 ACOD1A6NK06 481 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 M0R135 149 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 ABCD4O14678 606 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 CASKO14936 926 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 MAGEB4O15481 346 aaPredicted RBP12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 SMPD2O60906 423 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 CRYAAP02489 173 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 CCL2P13500 99 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 COL8A1P27658 744 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 ATP6V1E1P36543 226 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 GDI2P50395 445 aaKnown RBP12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 PSMA6P60900 246 aaKnown RBP12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 PLEKHG7Q6ZR37 379 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 Q6ZSR3 168 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 AHSA2Q719I0 299 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 PRSS48Q7RTY5 328 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 NAA40Q86UY6 237 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 C1orf174Q8IYL3 243 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 ZNF786Q8N393 782 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 OR52N1Q8NH53 320 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 ZNF799Q96GE5 643 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 C4orf45Q96LM5 186 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 TBX5Q99593 518 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 DOK1Q99704 481 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 MROQ9BYG7 248 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 ELOVL3Q9HB03 270 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 FAM206AQ9NX38 181 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 CLEC2DQ9UHP7 191 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 CAB39Q9Y376 341 aaPredicted RBP12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 RNF115Q9Y4L5 304 aa12.77□□□□□ -0.37
SNRPA1-207ENST00000559309 ABCA4P78363 2273 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 DAPL1A0PJW8 107 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 TRIM64CA6NLI5 447 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 ATP6V1G2-DDX39BF2Z307 99 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 PNPP00491 289 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 PLAUP00749 431 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 NGFP01138 241 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 COX6B1P14854 86 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 TUBG1P23258 451 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 GLRXP35754 106 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 RGS6P49758 472 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 UCP2P55851 309 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 OR12D2P58182 307 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 ACTA2P62736 377 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 ACTG2P63267 376 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 MSMPQ1L6U9 139 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 KCTD21Q4G0X4 260 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 LIPNQ5VXI9 398 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 RFPL4BQ6ZWI9 263 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 LHFPL3Q86UP9 236 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 NANOGP1Q8N7R0 232 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 TMEM171Q8WVE6 324 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 IGFBPL1Q8WX77 278 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 MYDGFQ969H8 173 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 SPTSSAQ969W0 71 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 SPSB4Q96A44 273 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 PELI1Q96FA3 418 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 ALG8Q9BVK2 526 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 ZNF442Q9H7R0 627 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 ISG20L2Q9H9L3 353 aaKnown RBP12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 G6PC2Q9NQR9 355 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 TUBG2Q9NRH3 451 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 CENPMQ9NSP4 180 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 ZNF319Q9P2F9 582 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 ERVK-18Q9QC07 812 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 OTOGQ6ZRI0 2925 aa12.76□□□□□ -0.37
SNRPA1-207ENST00000559309 APCP25054 2843 aa12.75□□□□□ -0.37
SNRPA1-207ENST00000559309 C5orf63A6NC05 138 aa12.75□□□□□ -0.37
SNRPA1-207ENST00000559309 APOC1P02654 83 aa12.75□□□□□ -0.37
SNRPA1-207ENST00000559309 CD3EP07766 207 aa12.75□□□□□ -0.37
SNRPA1-207ENST00000559309 H2BFMP0C1H6 154 aa12.75□□□□□ -0.37
SNRPA1-207ENST00000559309 RIDAP52758 137 aaKnown RBP12.75□□□□□ -0.37
SNRPA1-207ENST00000559309 TPTEP56180 551 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms