RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 ZNF442Q9H7R0 627 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 MOV10Q9HCE1 1003 aaKnown RBP9.35□□□□□ -0.91
TPM1-217ENST00000559108 MRM2Q9UI43 246 aaKnown RBP9.35□□□□□ -0.91
TPM1-217ENST00000559108 ATPIF1Q9UII2 106 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 ST6GALNAC2Q9UJ37 374 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 LAMP3Q9UQV4 416 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 GRIP1Q9Y3R0 1128 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 LRP12Q9Y561 859 aa9.35□□□□□ -0.91
TPM1-217ENST00000559108 ZNF878C9JN71 531 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 M0R135 149 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 OVOL3O00110 214 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 XPNPEP2O43895 674 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 LYNP07948 512 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 PCSK6P29122 969 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 CDKN1AP38936 164 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 VHLP40337 213 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 MTNR1AP48039 350 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 FABP6P51161 128 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 CXCR4P61073 352 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 PPP1CBP62140 327 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 ROM1Q03395 351 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 SPRNQ5BIV9 151 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 MEDAGQ5VYS4 303 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 CDH24Q86UP0 819 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 ZCCHC24Q8N2G6 241 aaKnown RBP9.34□□□□□ -0.91
TPM1-217ENST00000559108 ZNF454Q8N9F8 522 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 IL17RDQ8NFM7 739 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 OR52I1Q8NGK6 324 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 OR1J1Q8NGS3 322 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 OR2AE1Q8NHA4 323 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 IPCEF1Q8WWN9 437 aaPredicted RBP9.34□□□□□ -0.91
TPM1-217ENST00000559108 MRPL24Q96A35 216 aaKnown RBP9.34□□□□□ -0.91
TPM1-217ENST00000559108 ZNF799Q96GE5 643 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 DOK1Q99704 481 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 KCNJ15Q99712 375 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 APOL4Q9BPW4 351 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 COPS4Q9BT78 406 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 C1QTNF5Q9BXJ0 243 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 PAK1IP1Q9NWT1 392 aaPredicted RBP9.34□□□□□ -0.91
TPM1-217ENST00000559108 CLN6Q9NWW5 311 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 PTTG3PQ9NZH4 202 aa9.34□□□□□ -0.91
TPM1-217ENST00000559108 H2AFY2Q9P0M6 372 aaPredicted RBP9.34□□□□□ -0.91
TPM1-217ENST00000559108 EXOGQ9Y2C4 368 aaKnown RBP9.34□□□□□ -0.91
TPM1-217ENST00000559108 NAV2Q8IVL1 2488 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 IGLV3-9A0A075B6K5 115 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 LY6HO94772 140 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 PTHP01270 115 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 IGHA1P01876 353 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 LCKP06239 509 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 ZNF250P15622 560 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 MYF6P23409 242 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 APOBEC3AP31941 199 aaPredicted RBP9.33□□□□□ -0.92
TPM1-217ENST00000559108 CX3CR1P49238 355 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 ZNF121P58317 390 aaPredicted RBP9.33□□□□□ -0.92
TPM1-217ENST00000559108 TMED1Q13445 227 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 TNK1Q13470 666 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 IL18R1Q13478 541 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 EFNB3Q15768 340 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 GLYATL3Q5SZD4 288 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 ZNF544Q6NX49 715 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 ZNF322Q6U7Q0 402 aaPredicted RBP9.33□□□□□ -0.92
TPM1-217ENST00000559108 MUC15Q8N387 334 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 OR10H4Q8NGA5 316 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 OR1J2Q8NGS2 313 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 KLF14Q8TD94 323 aaPredicted RBP9.33□□□□□ -0.92
TPM1-217ENST00000559108 KCNS3Q9BQ31 491 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 ANKRD60Q9BZ19 345 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 ELOVL3Q9HB03 270 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 TBCCD1Q9NVR7 557 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 MRPS18AQ9NVS2 196 aaKnown RBP9.33□□□□□ -0.92
TPM1-217ENST00000559108 FAM206AQ9NX38 181 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 UBAP1Q9NZ09 502 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 LAMP5Q9UJQ1 280 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.33□□□□□ -0.92
TPM1-217ENST00000559108 TANC2Q9HCD6 1990 aa9.33□□□□□ -0.92
TPM1-217ENST00000559108 MPZL2O60487 215 aa9.32□□□□□ -0.92
TPM1-217ENST00000559108 RAF1P04049 648 aa9.32□□□□□ -0.92
TPM1-217ENST00000559108 LIMS3P0CW19 117 aa9.32□□□□□ -0.92
TPM1-217ENST00000559108 LIMS4P0CW20 117 aa9.32□□□□□ -0.92
TPM1-217ENST00000559108 SERPINF1P36955 418 aa9.32□□□□□ -0.92
TPM1-217ENST00000559108 ALDH3B1P43353 468 aa9.32□□□□□ -0.92
TPM1-217ENST00000559108 PSMA6P60900 246 aaKnown RBP9.32□□□□□ -0.92
TPM1-217ENST00000559108 ZNF92Q03936 586 aa9.32□□□□□ -0.92
TPM1-217ENST00000559108 ECH1Q13011 328 aa9.32□□□□□ -0.92
TPM1-217ENST00000559108 PSG7Q13046 419 aa9.32□□□□□ -0.92
TPM1-217ENST00000559108 TP53I3Q53FA7 332 aa9.32□□□□□ -0.92
TPM1-217ENST00000559108 RGS7BPQ6MZT1 257 aaPredicted RBP9.32□□□□□ -0.92
TPM1-217ENST00000559108 C20orf204Q6ZNR8 217 aa9.32□□□□□ -0.92
TPM1-217ENST00000559108 Q6ZR03 302 aa9.32□□□□□ -0.92
TPM1-217ENST00000559108 THAP5Q7Z6K1 395 aa9.32□□□□□ -0.92
TPM1-217ENST00000559108 C8orf59Q8N0T1 100 aaPredicted RBP9.32□□□□□ -0.92
TPM1-217ENST00000559108 GGHQ92820 318 aa9.32□□□□□ -0.92
TPM1-217ENST00000559108 RFKQ969G6 155 aa9.32□□□□□ -0.92
TPM1-217ENST00000559108 LYZL4Q96KX0 146 aa9.32□□□□□ -0.92
TPM1-217ENST00000559108 CCL19Q99731 98 aa9.32□□□□□ -0.92
TPM1-217ENST00000559108 CACNG6Q9BXT2 260 aa9.32□□□□□ -0.92
TPM1-217ENST00000559108 VCXQ9H320 206 aa9.32□□□□□ -0.92
TPM1-217ENST00000559108 PLK3Q9H4B4 646 aa9.32□□□□□ -0.92
TPM1-217ENST00000559108 PPP1R3EQ9H7J1 279 aa9.32□□□□□ -0.92
TPM1-217ENST00000559108 ISG20L2Q9H9L3 353 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms