RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 COX4I1P13073 169 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 CPEP16870 476 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 MSR1P21757 451 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 HTR5AP47898 357 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 GSK3BP49841 420 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 ARHGDIAP52565 204 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 RAP1BP61224 184 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 PCBD1P61457 104 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 LMO4P61968 165 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 RAP1AP62834 184 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 ACTG1P63261 375 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 IL13RA1P78552 427 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 LCN2P80188 198 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 DBPQ10586 325 aaPredicted RBP6.21□□□□□ -1.42
SPG11-213ENST00000558988 ENDOGQ14249 297 aaKnown RBP6.21□□□□□ -1.42
SPG11-213ENST00000558988 MOGQ16653 247 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 TMEM255AQ5JRV8 349 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 UGT2A3Q6UWM9 527 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 UNQ6126/PRO20091Q6UXV3 157 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 ARPINQ7Z6K5 226 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 CYP4Z1Q86W10 505 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 SLC15A3Q8IY34 581 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 OFCC1Q8IZS5 231 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 RFLNBQ8N5W9 214 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 RNF148Q8N7C7 305 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 OR52J3Q8NH60 311 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 RP9Q8TA86 221 aaKnown RBP6.21□□□□□ -1.42
SPG11-213ENST00000558988 KLF14Q8TD94 323 aaPredicted RBP6.21□□□□□ -1.42
SPG11-213ENST00000558988 SLC7A6Q92536 515 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 RAB1CQ92928 201 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 NMD3Q96D46 503 aaKnown RBP6.21□□□□□ -1.42
SPG11-213ENST00000558988 RAB39BQ96DA2 213 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 ELMOD3Q96FG2 381 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 Q96M85 177 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 ZNF570Q96NI8 536 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 SEPHS2Q99611 448 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 KCTD14Q9BQ13 255 aaPredicted RBP6.21□□□□□ -1.42
SPG11-213ENST00000558988 ALG12Q9BV10 488 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 NDEL1Q9GZM8 345 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 SMURF2Q9HAU4 748 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 MAN2C1Q9NTJ4 1040 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 MRGBPQ9NV56 204 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 ZNF446Q9NWS9 450 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 DCAF16Q9NXF7 216 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 ADA2Q9NZK5 511 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 TIMM10BQ9Y5J6 103 aa6.21□□□□□ -1.42
SPG11-213ENST00000558988 FBN1P35555 2871 aaKnown RBP6.21□□□□□ -1.42
SPG11-213ENST00000558988 A0A0G2JMP0 313 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 A0A0X1KG70 313 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 A0A1W2PRX2 142 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 C12orf71A8MTZ7 269 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 IMPA2O14732 288 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 SLC16A7O60669 478 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 VENTXO95231 258 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 PNPP00491 289 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 IGHV3-13P01766 116 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 CST2P09228 141 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 SBK2P0C263 348 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 ANPEPP15144 967 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 GSTM3P21266 225 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 CRYBB2P43320 205 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 MRPS11P82912 194 aaKnown RBP6.2□□□□□ -1.42
SPG11-213ENST00000558988 TNFAIP6P98066 277 aaPredicted RBP6.2□□□□□ -1.42
SPG11-213ENST00000558988 PRKCDQ05655 676 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 KRR1Q13601 381 aaKnown RBP6.2□□□□□ -1.42
SPG11-213ENST00000558988 ZBED5Q49AG3 693 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 SPRNQ5BIV9 151 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 FAM27BQ5VT28 67 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 DCAF12L2Q5VW00 463 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 FAM205BPQ63HN1 556 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 ACSM5Q6NUN0 579 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 C12orf54Q6X4T0 127 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 PEG10Q86TG7 708 aaKnown RBP6.2□□□□□ -1.42
SPG11-213ENST00000558988 OR5AS1Q8N127 324 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 LRRC75AQ8NAA5 344 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 OR2Z1Q8NG97 314 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 OR4M2Q8NGB6 313 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 LIPHQ8WWY8 451 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 ACOT11Q8WXI4 607 aaPredicted RBP6.2□□□□□ -1.42
SPG11-213ENST00000558988 C22orf15Q8WYQ4 148 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 MARS2Q96GW9 593 aaKnown RBP6.2□□□□□ -1.42
SPG11-213ENST00000558988 C4orf45Q96LM5 186 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 ELAC2Q9BQ52 826 aaKnown RBP6.2□□□□□ -1.42
SPG11-213ENST00000558988 EGLN1Q9GZT9 426 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 RACGAP1Q9H0H5 632 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 SYT4Q9H2B2 425 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 POFUT1Q9H488 388 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 ELOVL3Q9HB03 270 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 SMURF1Q9HCE7 757 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 POLE4Q9NR33 117 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 AURKCQ9UQB9 309 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 FAM32AQ9Y421 112 aaKnown RBP6.2□□□□□ -1.42
SPG11-213ENST00000558988 IER3IP1Q9Y5U9 82 aa6.2□□□□□ -1.42
SPG11-213ENST00000558988 STAB1Q9NY15 2570 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 ARHGAP32A7KAX9 2087 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 VPS13CQ709C8 3753 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 NPIPB13A6NJU9 1138 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 NPIPB4C9JG80 1138 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 SGCEO43556 437 aa6.19□□□□□ -1.42
SPG11-213ENST00000558988 CCDC22O60826 627 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms