RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 FABP6P51161 128 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 TPTEP56180 551 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 GRB2P62993 217 aaKnown RBP10.72□□□□□ -0.69
GABPB1-208ENST00000558970 MVKQ03426 396 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 ZNF85Q03923 595 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 ECH1Q13011 328 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 RSPO1Q2MKA7 263 aaPredicted RBP10.72□□□□□ -0.69
GABPB1-208ENST00000558970 ZNF672Q499Z4 452 aaPredicted RBP10.72□□□□□ -0.69
GABPB1-208ENST00000558970 KLHL22Q53GT1 634 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 C6orf141Q5SZD1 244 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 C1QTNF12Q5T7M4 302 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 STX19Q8N4C7 294 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 ZNF540Q8NDQ6 660 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 IL17RDQ8NFM7 739 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 OR2T27Q8NH04 317 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 FBLIM1Q8WUP2 373 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 SNX33Q8WV41 574 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 SGCDQ92629 289 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 FBXW5Q969U6 566 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 C14orf79Q96F83 325 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 KCNJ15Q99712 375 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 TMEM204Q9BSN7 226 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 MROQ9BYG7 248 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 ELOVL3Q9HB03 270 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 CA10Q9NS85 328 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 DDX28Q9NUL7 540 aaKnown RBP10.72□□□□□ -0.69
GABPB1-208ENST00000558970 UBAP1Q9NZ09 502 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 PTTG3PQ9NZH4 202 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 GNG8Q9UK08 70 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 EXOGQ9Y2C4 368 aaKnown RBP10.72□□□□□ -0.69
GABPB1-208ENST00000558970 SPEF1Q9Y4P9 236 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 RTTNQ86VV8 2226 aa10.72□□□□□ -0.69
GABPB1-208ENST00000558970 FAM221AA4D161 298 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 HS3ST1O14792 307 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 PHYHO14832 338 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 PSMB10P40306 273 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 SLC15A1P46059 708 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 UCP2P55851 309 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 ZNF121P58317 390 aaPredicted RBP10.71□□□□□ -0.69
GABPB1-208ENST00000558970 PPP1CBP62140 327 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 ACTC1P68032 377 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 ACTA1P68133 377 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 ST3GAL4Q11206 333 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 RAB40BQ12829 278 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 HLXQ14774 488 aaPredicted RBP10.71□□□□□ -0.69
GABPB1-208ENST00000558970 SNAI3Q3KNW1 292 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 ALKBH6Q3KRA9 238 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 RGS7BPQ6MZT1 257 aaPredicted RBP10.71□□□□□ -0.69
GABPB1-208ENST00000558970 FAM57BQ71RH2 274 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 LRP11Q86VZ4 500 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 ACBD7Q8N6N7 88 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 OR2AE1Q8NHA4 323 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 SLC25A40Q8TBP6 338 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 ASB17Q8WXJ9 295 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 OR8B4Q96RC9 309 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 DOK1Q99704 481 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 SYT3Q9BQG1 590 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 ALG8Q9BVK2 526 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 OR2J1Q9GZK6 312 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 MRM2Q9UI43 246 aaKnown RBP10.71□□□□□ -0.69
GABPB1-208ENST00000558970 DUSP13Q9UII6 198 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 STARD10Q9Y365 291 aa10.71□□□□□ -0.69
GABPB1-208ENST00000558970 OTOGQ6ZRI0 2925 aa10.71□□□□□ -0.7
GABPB1-208ENST00000558970 DSCAMO60469 2012 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 H3BSH0 61 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 J3QLW9 94 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 J3QRE1 110 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 CLPTM1O96005 669 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 KRT8P05787 483 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 OR4A8P0C604 315 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 ZNF19P17023 458 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 RAD52P43351 418 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 ETV1P50549 477 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 RIDAP52758 137 aaKnown RBP10.7□□□□□ -0.7
GABPB1-208ENST00000558970 RIPPLY3P57055 190 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 OR12D2P58182 307 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 NKX6-1P78426 367 aaPredicted RBP10.7□□□□□ -0.7
GABPB1-208ENST00000558970 MFGE8Q08431 387 aaPredicted RBP10.7□□□□□ -0.7
GABPB1-208ENST00000558970 MED21Q13503 144 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 MSMPQ1L6U9 139 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 ODF4Q2M2E3 257 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 ARL9Q6T311 187 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 FAM220AQ7Z4H9 259 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 ZNF679Q8IYX0 411 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 TMEM80Q96HE8 168 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 PGAM5Q96HS1 289 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 C4orf36Q96KX1 117 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 MNTQ99583 582 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 ACOXLQ9NUZ1 547 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 PAK1IP1Q9NWT1 392 aaPredicted RBP10.7□□□□□ -0.7
GABPB1-208ENST00000558970 ERVK13-1Q9NX77 482 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 SCN3BQ9NY72 215 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 PSORS1C1Q9UIG5 152 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 ATPIF1Q9UII2 106 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 LAMP3Q9UQV4 416 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 PCDHGB1Q9Y5G3 927 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 CSMD1Q96PZ7 3565 aa10.7□□□□□ -0.7
GABPB1-208ENST00000558970 TMEM269A0A1B0GVZ9 245 aa10.69□□□□□ -0.7
GABPB1-208ENST00000558970 EFCAB10A6NFE3 127 aa10.69□□□□□ -0.7
GABPB1-208ENST00000558970 DENRO43583 198 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms