RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 QPRTQ15274 297 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 C22orf42Q6IC83 251 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 REEP3Q6NUK4 255 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 BZW1Q7L1Q6 419 aaKnown RBP1.6□□□□□ -2.15
VPS13C-207ENST00000558919 SLC16A14Q7RTX9 510 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 OR4A4PQ8NGN8 299 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 OR1P1Q8NH06 330 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 ZNF502Q8TBZ5 544 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 SLC7A13Q8TCU3 470 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 TSEN15Q8WW01 171 aaKnown RBP1.6□□□□□ -2.15
VPS13C-207ENST00000558919 ZCCHC13Q8WW36 166 aaKnown RBP1.6□□□□□ -2.15
VPS13C-207ENST00000558919 DUS3LQ96G46 650 aaKnown RBP1.6□□□□□ -2.15
VPS13C-207ENST00000558919 CDX2Q99626 313 aaPredicted RBP1.6□□□□□ -2.15
VPS13C-207ENST00000558919 HSD17B10Q99714 261 aaKnown RBP1.6□□□□□ -2.15
VPS13C-207ENST00000558919 C20orf24Q9BUV8 137 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 NEUROG2Q9H2A3 272 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 ANKRA2Q9H9E1 313 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 SAMSN1Q9NSI8 373 aaKnown RBP1.6□□□□□ -2.15
VPS13C-207ENST00000558919 HRASLS2Q9NWW9 162 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 RABL2AQ9UBK7 228 aaPredicted RBP1.6□□□□□ -2.15
VPS13C-207ENST00000558919 LGALS13Q9UHV8 139 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 TRMT112Q9UI30 125 aaKnown RBP1.6□□□□□ -2.15
VPS13C-207ENST00000558919 VANGL2Q9ULK5 521 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 CBY1Q9Y3M2 126 aa1.6□□□□□ -2.15
VPS13C-207ENST00000558919 SEC16AO15027 2179 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 ITGB4P16144 1822 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 TRBV9A0A0B4J1U6 114 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 LYRM9A8MSI8 78 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 DNALI1O14645 258 aaPredicted RBP1.59□□□□□ -2.15
VPS13C-207ENST00000558919 LSM1O15116 133 aaKnown RBP1.59□□□□□ -2.15
VPS13C-207ENST00000558919 CHST10O43529 356 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 KLHL41O60662 606 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 CDH16O75309 829 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 SERPINA5P05154 406 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 CTSLP07711 333 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 ZNF250P15622 560 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 EIF2S2P20042 333 aaKnown RBP1.59□□□□□ -2.15
VPS13C-207ENST00000558919 ME2P23368 584 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 TGFBR1P36897 503 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 GPX4P36969 197 aaPredicted RBP1.59□□□□□ -2.15
VPS13C-207ENST00000558919 TNFSF9P41273 254 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 SYKP43405 635 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 HCAR3P49019 387 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 P2RX1P51575 399 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 CHRNA6Q15825 494 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 MRPL23Q16540 153 aaKnown RBP1.59□□□□□ -2.15
VPS13C-207ENST00000558919 PGGHGQ32M88 737 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 KRTAP6-3Q3LI67 103 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 MPV17L2Q567V2 206 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 PPM1LQ5SGD2 360 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 TMEM256Q8N2U0 113 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 OR52K2Q8NGK3 314 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 OR2A1Q8NGT9 310 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 FAM81AQ8TBF8 368 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 TVP23CQ96ET8 276 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 EXO5Q9H790 373 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 SLC38A10Q9HBR0 1119 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 TMEM165Q9HC07 324 aa1.59□□□□□ -2.15
VPS13C-207ENST00000558919 TSPOAP1O95153 1857 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 C5orf63A6NC05 138 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 SMCO2A6NFE2 343 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 EIF4E2O60573 245 aaKnown RBP1.58□□□□□ -2.16
VPS13C-207ENST00000558919 ACSM4P0C7M7 580 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 CT45A6P0DMU7 189 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 CT45A5P0DMU8 189 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 CT45A7P0DMV0 189 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 SFTPCP11686 197 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 GALP22466 123 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 MRPL19P49406 292 aaKnown RBP1.58□□□□□ -2.16
VPS13C-207ENST00000558919 RAB9AP51151 201 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 TAS2R31P59538 309 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 LIPEQ05469 1076 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 FUT5Q11128 374 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 MERTKQ12866 999 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 SELENBP1Q13228 472 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 OR7A5Q15622 319 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 ALKBH6Q3KRA9 238 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 HSDL1Q3SXM5 330 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 RNASE13Q5GAN3 156 aaKnown RBP1.58□□□□□ -2.16
VPS13C-207ENST00000558919 TCEAL5Q5H9L2 206 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 CT45A1Q5HYN5 189 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 FAM222AQ5U5X8 452 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 SSX9Q7RTT3 188 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 LUZP2Q86TE4 346 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 TMEM150AQ86TG1 271 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 PRELID2Q8N945 189 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 TMEM104Q8NE00 496 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 OR5B3Q8NH48 314 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 CT45A3Q8NHU0 189 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 TCEAL3Q969E4 200 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 C8orf44Q96CB5 159 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 DNAJC1Q96KC8 554 aaKnown RBP1.58□□□□□ -2.16
VPS13C-207ENST00000558919 PANX1Q96RD7 426 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 RSG1Q9BU20 258 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 FGF23Q9GZV9 251 aaPredicted RBP1.58□□□□□ -2.16
VPS13C-207ENST00000558919 GEMIN7Q9H840 131 aaKnown RBP1.58□□□□□ -2.16
VPS13C-207ENST00000558919 C8orf17Q9NRJ1 99 aa1.58□□□□□ -2.16
VPS13C-207ENST00000558919 LYARQ9NX58 379 aaKnown RBP1.58□□□□□ -2.16
VPS13C-207ENST00000558919 MTCH1Q9NZJ7 389 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms