RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 ZNF774Q6NX45 483 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 SLC25A47Q6Q0C1 308 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 DHDDSQ86SQ9 333 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 LRRC28Q86X40 367 aaPredicted RBP8.07□□□□□ -1.12
SPG11-212ENST00000558790 OR2Z1Q8NG97 314 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 OR52E2Q8NGJ4 325 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 TMEM255BQ8WV15 326 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 ITLN1Q8WWA0 313 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 C4orf45Q96LM5 186 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 OR14A2Q96R54 314 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 PDP1Q9P0J1 537 aaPredicted RBP8.07□□□□□ -1.12
SPG11-212ENST00000558790 STX18Q9P2W9 335 aaKnown RBP8.07□□□□□ -1.12
SPG11-212ENST00000558790 LRCH1Q9Y2L9 728 aa8.07□□□□□ -1.12
SPG11-212ENST00000558790 PLXNB1O43157 2135 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 IGHV2-70DA0A0C4DH43 119 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 NPIPB13A6NJU9 1138 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 NPIPB4C9JG80 1138 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 HOXA3O43365 443 aaPredicted RBP8.06□□□□□ -1.12
SPG11-212ENST00000558790 PIP5K1CO60331 668 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 ABHD16AO95870 558 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 CST2P09228 141 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 TSPAN19P0C672 248 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 PPIAL4GP0DN37 164 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 PF4V1P10720 104 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 THRBP10828 461 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 TNFRSF1AP19438 455 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 TNFSF4P23510 183 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 MDH2P40926 338 aaKnown RBP8.06□□□□□ -1.12
SPG11-212ENST00000558790 MTNR1AP48039 350 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 ERFP50548 548 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 ARHGDIAP52565 204 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 SLC18A1P54219 525 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 RAG2P55895 527 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 ENDOGQ14249 297 aaKnown RBP8.06□□□□□ -1.12
SPG11-212ENST00000558790 GAGE13Q4V321 117 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 AGKQ53H12 422 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 RUNDC3AQ59EK9 446 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 FAM27BQ5VT28 67 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 BRD3OSQ6XYD6 125 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 NKAIN4Q8IVV8 208 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 C1orf174Q8IYL3 243 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 UPRTQ96BW1 309 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 SGTBQ96EQ0 304 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 SAMD8Q96LT4 415 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 OR2V2Q96R30 315 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 PKP2Q99959 881 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 SSBP3Q9BWW4 388 aaPredicted RBP8.06□□□□□ -1.12
SPG11-212ENST00000558790 TXNIPQ9H3M7 391 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 NANOGQ9H9S0 305 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 ELOVL3Q9HB03 270 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 NKIRAS1Q9NYS0 192 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 PPP1R3CQ9UQK1 317 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 MMP24Q9Y5R2 645 aa8.06□□□□□ -1.12
SPG11-212ENST00000558790 A0A1W2PPL8 197 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 UBE2QL1A1L167 161 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 GMNCA6NCL1 334 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 TMEM178BH3BS89 294 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 SHOX2O60902 331 aaPredicted RBP8.05□□□□□ -1.12
SPG11-212ENST00000558790 NR2C1P13056 603 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 RPS2P15880 293 aaKnown RBP8.05□□□□□ -1.12
SPG11-212ENST00000558790 TNFRSF1BP20333 461 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 GSTM3P21266 225 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 KITLGP21583 273 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 RBM34P42696 430 aaKnown RBP8.05□□□□□ -1.12
SPG11-212ENST00000558790 TAS2R41P59536 307 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 MAGOHP61326 146 aaKnown RBP8.05□□□□□ -1.12
SPG11-212ENST00000558790 DEFB112Q30KQ8 113 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 C16orf87Q6PH81 154 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 BTNL3Q6UXE8 466 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 C17orf107Q6ZR85 190 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 FOXL2NBQ6ZUU3 175 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 ZER1Q7Z7L7 766 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 PATL1Q86TB9 770 aaKnown RBP8.05□□□□□ -1.12
SPG11-212ENST00000558790 IGFN1Q86VF2 1251 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 CMTM4Q8IZR5 234 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 MUC20Q8N307 709 aaPredicted RBP8.05□□□□□ -1.12
SPG11-212ENST00000558790 KIR3DL3Q8N743 410 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 NPEPL1Q8NDH3 523 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 OR10AD1Q8NGE0 317 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 TMEM239Q8WW34 195 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 RAB24Q969Q5 203 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 THOC1Q96FV9 657 aaKnown RBP8.05□□□□□ -1.12
SPG11-212ENST00000558790 C7orf26Q96N11 449 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 CITED1Q99966 193 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 ALG12Q9BV10 488 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 PARD6BQ9BYG5 372 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 MARCH7Q9H992 704 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 TNFRSF19Q9NS68 423 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 IL19Q9UHD0 177 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 IL20RAQ9UHF4 553 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 TIMM10BQ9Y5J6 103 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 DNAH9Q9NYC9 4486 aa8.05□□□□□ -1.12
SPG11-212ENST00000558790 SRRM5B3KS81 715 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 DOK2O60496 412 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 SCGB1D2O95969 90 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 IGF2P01344 180 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 VIMP08670 466 aaKnown RBP8.04□□□□□ -1.12
SPG11-212ENST00000558790 WNT2P09544 360 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 MSR1P21757 451 aa8.04□□□□□ -1.12
SPG11-212ENST00000558790 HTR5AP47898 357 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms