RNA–Protein interactions for RNA: ENST00000558534.5

RABGGTA-205, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-205ENST00000558534 LOXL1Q08397 574 aaPredicted RBP13.51□□□□□ -0.25
RABGGTA-205ENST00000558534 EIF2B1Q14232 305 aaKnown RBP13.51□□□□□ -0.25
RABGGTA-205ENST00000558534 LINC01590Q5TEZ4 76 aa13.51□□□□□ -0.25
RABGGTA-205ENST00000558534 SLX4IPQ5VYV7 408 aa13.51□□□□□ -0.25
RABGGTA-205ENST00000558534 FBXW12Q6X9E4 464 aa13.51□□□□□ -0.25
RABGGTA-205ENST00000558534 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.51□□□□□ -0.25
RABGGTA-205ENST00000558534 CPOQ8IVL8 374 aa13.51□□□□□ -0.25
RABGGTA-205ENST00000558534 ZNF511Q8NB15 262 aa13.51□□□□□ -0.25
RABGGTA-205ENST00000558534 SLAMF6Q96DU3 332 aa13.51□□□□□ -0.25
RABGGTA-205ENST00000558534 ELMOD3Q96FG2 381 aa13.51□□□□□ -0.25
RABGGTA-205ENST00000558534 MNTQ99583 582 aa13.51□□□□□ -0.25
RABGGTA-205ENST00000558534 KCNJ15Q99712 375 aa13.51□□□□□ -0.25
RABGGTA-205ENST00000558534 CIB1Q99828 191 aa13.51□□□□□ -0.25
RABGGTA-205ENST00000558534 GABARAPL3Q9BY60 117 aa13.51□□□□□ -0.25
RABGGTA-205ENST00000558534 TPK1Q9H3S4 243 aa13.51□□□□□ -0.25
RABGGTA-205ENST00000558534 NIPAL2Q9H841 368 aa13.51□□□□□ -0.25
RABGGTA-205ENST00000558534 CHODLQ9H9P2 273 aa13.51□□□□□ -0.25
RABGGTA-205ENST00000558534 SAP30LQ9HAJ7 183 aa13.51□□□□□ -0.25
RABGGTA-205ENST00000558534 S100A14Q9HCY8 104 aa13.51□□□□□ -0.25
RABGGTA-205ENST00000558534 ACANP16112 2415 aa13.51□□□□□ -0.25
RABGGTA-205ENST00000558534 SAC3D1A6NKF1 404 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 ZAR1LA6NP61 321 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 SMAD7O15105 426 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 LCATP04180 440 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 LYNP07948 512 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 ACSM4P0C7M7 580 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 CLUP10909 449 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 NAT2P11245 290 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 GIFP27352 417 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 ALDH3A2P51648 485 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 MAD2L1BPQ15013 274 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 SNCBQ16143 134 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 MSMPQ1L6U9 139 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 KRTAP27-1Q3LI81 207 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 NXNL2Q5VZ03 156 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 KCTD18Q6PI47 426 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 CLEC9AQ6UXN8 241 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 COLCA1Q6ZS62 124 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 DPY19L4Q7Z388 723 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 TMEM163Q8TC26 289 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 HAVCR1Q96D42 359 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 MAP6Q96JE9 813 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 ZNF582Q96NG8 517 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 PKP2Q99959 881 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 MED20Q9H944 212 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 WDR76Q9H967 626 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 CENPMQ9NSP4 180 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 USE1Q9NZ43 259 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 MYEF2Q9P2K5 600 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 PURGQ9UJV8 347 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 STARD10Q9Y365 291 aa13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 TEP1Q99973 2627 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-205ENST00000558534 IGHV4-30-2A0A087WSY4 118 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 SNTNA6NMZ2 147 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 PHYHO14832 338 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 XRCC2O43543 280 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 DBHP09172 617 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 TNFRSF1AP19438 455 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 USF1P22415 310 aaPredicted RBP13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 CFL1P23528 166 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 OTX1P32242 354 aaPredicted RBP13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 MPV17P39210 176 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 MMP15P51511 669 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 TMEM33P57088 247 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 POU4F2Q12837 409 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 PSG7Q13046 419 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 TMED1Q13445 227 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 APOFQ13790 326 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 TMEM236Q5W0B7 351 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 PGAP1Q75T13 922 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 TIGD4Q8IY51 512 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 OR52H1Q8NGJ2 320 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 OR8J1Q8NGP2 316 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 OTOSQ8NHW6 89 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 RNF133Q8WVZ7 376 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 TRUB1Q8WWH5 349 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 ASB17Q8WXJ9 295 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 SLC7A6Q92536 515 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 RFKQ969G6 155 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 ITFG2Q969R8 447 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 CMBLQ96DG6 245 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 ZMYND19Q96E35 227 aaPredicted RBP13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 YIPF3Q9GZM5 350 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 SLC22A4Q9H015 551 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 RIBC2Q9H4K1 309 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 PNRC2Q9NPJ4 139 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 C8orf4Q9NR00 106 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 IMPAD1Q9NX62 359 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 LAMP5Q9UJQ1 280 aa13.49□□□□□ -0.25
RABGGTA-205ENST00000558534 H3BNX3 289 aa13.48□□□□□ -0.25
RABGGTA-205ENST00000558534 IFNL4K9M1U5 179 aa13.48□□□□□ -0.25
RABGGTA-205ENST00000558534 TLX2O43763 284 aaPredicted RBP13.48□□□□□ -0.25
RABGGTA-205ENST00000558534 CD55P08174 381 aa13.48□□□□□ -0.25
RABGGTA-205ENST00000558534 H2BFMP0C1H6 154 aa13.48□□□□□ -0.25
RABGGTA-205ENST00000558534 NR4A2P43354 598 aa13.48□□□□□ -0.25
RABGGTA-205ENST00000558534 CHN2P52757 468 aa13.48□□□□□ -0.25
RABGGTA-205ENST00000558534 ZSCAN26Q16670 478 aa13.48□□□□□ -0.25
RABGGTA-205ENST00000558534 HFEQ30201 348 aa13.48□□□□□ -0.25
RABGGTA-205ENST00000558534 ALKBH6Q3KRA9 238 aa13.48□□□□□ -0.25
RABGGTA-205ENST00000558534 OTPQ5XKR4 325 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms