RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 A0A1W2PR80 420 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 NKX2-6A6NCS4 301 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 AGFG1P52594 562 aaKnown RBP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 SLC35E3Q7Z769 313 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 PUSL1Q8N0Z8 303 aaKnown RBP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 SDF2Q99470 211 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 HLA-DQB1P01920 261 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 HIST1H1CP16403 213 aaKnown RBP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 LRP10Q7Z4F1 713 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 OR5A2Q8NGI9 324 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 NUDT11Q96G61 164 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 LRFN3Q9BTN0 628 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 OR6C3Q9NZP0 311 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 VSTM2BA6NLU5 285 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 TBX19O60806 448 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 DDAH2O95865 285 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 SPCS3P61009 180 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 ATP6V1FQ16864 119 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 SAPCD1Q5SSQ6 148 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 SLC25A42Q86VD7 318 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 MTURNQ8N3F0 131 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 UBL7Q96S82 380 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 CXCL16Q9H2A7 254 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 AKIRIN1Q9H9L7 192 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 PPP1R14DQ9NXH3 145 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 H0YGG7 62 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 CD79AP11912 226 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 TAS2R60P59551 318 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 FAM78BQ5VT40 261 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 DMRT3Q9NQL9 472 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 KCND3Q9UK17 655 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 GLCEO94923 617 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 SELPP16109 830 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 TMEM255AQ5JRV8 349 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 C19orf35Q6ZS72 473 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 ADAD2Q8NCV1 583 aaKnown RBP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 NTNG2Q96CW9 530 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 GPR62Q9BZJ7 368 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 TAS2R4Q9NYW5 299 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 RCC2Q9P258 522 aaKnown RBP3.36□□□□□ -1.87
ATXN3-248ENST00000558190 B9D1Q9UPM9 204 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 OR5H15A6NDH6 313 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 OR5H1A6NKK0 313 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 LINC00346Q8IVM7 164 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 TMEM251Q8N6I4 163 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 DTD2Q96FN9 168 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 Q96M85 177 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 GAPVD1Q14C86 1478 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 SELENOFO60613 162 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 NSUN5P2Q63ZY6 315 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 ZDHHC22Q8N966 263 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 NUDT10Q8NFP7 164 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 PCED1AQ9H1Q7 454 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 TMPRSS11DO60235 418 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 S100A7AQ86SG5 101 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 C17orf78Q8N4C9 275 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 SLC24A4Q8NFF2 622 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 DEFB126Q9BYW3 111 aa3.36□□□□□ -1.87
ATXN3-248ENST00000558190 ABCA4P78363 2273 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 SLC5A10A0PJK1 596 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 FFAR1O14842 300 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 DUS4LO95620 317 aaKnown RBP3.35□□□□□ -1.87
ATXN3-248ENST00000558190 LIMS3P0CW19 117 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 LIMS4P0CW20 117 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 TEX30Q5JUR7 227 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 ASTLQ6HA08 431 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-248ENST00000558190 TMEM210A6NLX4 147 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 RAB38P57729 211 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 PMS2P11Q13670 270 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 GCNT2Q8N0V5 402 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 OR4N2Q8NGD1 307 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 OR2AE1Q8NHA4 323 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 OR2D2Q9H210 308 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 LIN7CQ9NUP9 197 aaKnown RBP3.35□□□□□ -1.87
ATXN3-248ENST00000558190 K7ERU9 68 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 CLEC3BP05452 202 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 IL2RGP31785 369 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 ERVK-16P61578 105 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 PDCD1Q15116 288 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 FUT10Q6P4F1 479 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 DEGS2Q6QHC5 323 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 LANCL3Q6ZV70 420 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 GALNT16Q8N428 558 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 GPR32P1Q8NGA4 272 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 TMEM186Q96B77 213 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 CLDND1Q9NY35 253 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 ASB1Q9Y576 335 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 MED14O60244 1454 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 SOD3P08294 240 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 AKR1A1P14550 325 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 FGF8P55075 233 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-248ENST00000558190 FAM26DQ5JW98 314 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 GRINAQ7Z429 371 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF740Q8NDX6 193 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 NXPE3Q969Y0 559 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 METTL1Q9UBP6 276 aaKnown RBP3.35□□□□□ -1.87
ATXN3-248ENST00000558190 FGF5P12034 268 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 TBPP20226 339 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 TMEM174Q8WUU8 243 aa3.35□□□□□ -1.87
ATXN3-248ENST00000558190 OR5B2Q96R09 309 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms