RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 PFN3P60673 137 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 ERVS71-1P61550 626 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 ARF6P62330 175 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 FLOT2Q14254 428 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 C16orf72Q14CZ0 275 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 TMED2Q15363 201 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 TSC22D1Q15714 1073 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 NDUFA5Q16718 116 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 IMPG1Q17R60 797 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 NDUFAF6Q330K2 333 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 COX19Q49B96 90 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 TMEM52BQ4KMG9 183 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 SAMD4BQ5PRF9 694 aaKnown RBP2.06□□□□□ -2.08
SPG11-206ENST00000558093 LY6G6FQ5SQ64 297 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 REEP3Q6NUK4 255 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 UNQ9370/PRO34162Q6UXP9 181 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 H2BFWTQ7Z2G1 175 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 SETD3Q86TU7 594 aaPredicted RBP2.06□□□□□ -2.08
SPG11-206ENST00000558093 ACOT1Q86TX2 421 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 TMEM17Q86X19 198 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 H1FOOQ8IZA3 346 aaPredicted RBP2.06□□□□□ -2.08
SPG11-206ENST00000558093 HS3ST5Q8IZT8 346 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 SYS1Q8N2H4 156 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 TMEM156Q8N614 296 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 NATD1Q8N6N6 113 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 C8orf31Q8N9H6 132 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 CDRT4Q8N9R6 151 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 MFSD9Q8NBP5 474 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 NECAP1Q8NC96 275 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 OR52N1Q8NH53 320 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 OR1F12Q8NHA8 337 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 NEK7Q8TDX7 302 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 TMEM239Q8WW34 195 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 SMARCD2Q92925 531 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 HGDQ93099 445 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 SMIM10Q96HG1 83 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 CSPG4P5Q96PW8 444 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 KLHDC3Q9BQ90 382 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 TIMM29Q9BSF4 260 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 BCL2L14Q9BZR8 327 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 METTL9Q9H1A3 318 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 TPK1Q9H3S4 243 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 PLEKHA1Q9HB21 404 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 XPNPEP1Q9NQW7 623 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 INPP5EQ9NRR6 644 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 INIPQ9NRY2 104 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 EXD2Q9NVH0 621 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 GID8Q9NWU2 228 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 CMTM6Q9NX76 183 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 USE1Q9NZ43 259 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 GNG12Q9UBI6 72 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 STOML2Q9UJZ1 356 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 IKZF2Q9UKS7 526 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 NPIPA1Q9UND3 350 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 PSG11Q9UQ72 335 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 RNF6Q9Y252 685 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 POLR3HQ9Y535 204 aaPredicted RBP2.06□□□□□ -2.08
SPG11-206ENST00000558093 TIMM10BQ9Y5J6 103 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 MRPS18BQ9Y676 258 aaKnown RBP2.06□□□□□ -2.08
SPG11-206ENST00000558093 CHD5Q8TDI0 1954 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 ASTN1O14525 1302 aa2.06□□□□□ -2.08
SPG11-206ENST00000558093 VIRMAQ69YN4 1812 aaKnown RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 MYH10P35580 1976 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 KCNE1BA0A087WTH5 132 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 PPIAL4CA0A0B4J2A2 164 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 KBTBD11-OT1A0A1B0GTJ5 212 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 A0A1W2PNV4 684 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 A0A1W2PPE3 182 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 TMEM213A2RRL7 107 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 TMX2-CTNND1H3BSU7 103 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 M0R3G1 203 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 SULT2B1O00204 365 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 GOSR2O14653 212 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 TPST2O60704 377 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 SLC19A2O60779 497 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 N4BP1O75113 896 aaKnown RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 FCN3O75636 299 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 SRP72O76094 671 aaKnown RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 B3GAT3O94766 335 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 TNFAIP8O95379 198 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 LDOC1O95751 146 aaPredicted RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 IFNA5P01569 189 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 IFNW1P05000 195 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 CT62P0C5K7 136 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 PPIAL4GP0DN37 164 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 HSPD1P10809 573 aaKnown RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 HLA-GP17693 338 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 PSMC3P17980 439 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 BCKDHBP21953 392 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 COX7A1P24310 79 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 CD1CP29017 333 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 CALCRP30988 508 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 IFNA8P32881 189 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 PCK1P35558 622 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 HPCAL1P37235 193 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 RBM34P42696 430 aaKnown RBP2.05□□□□□ -2.08
SPG11-206ENST00000558093 CRYBB2P43320 205 aa2.05□□□□□ -2.08
SPG11-206ENST00000558093 CSNK1A1P48729 337 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms