RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 LMX1BO60663 402 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 UPK1BO75841 260 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 ARL6IP5O75915 188 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 IGHG3P01860 377 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 OCM2P0CE71 109 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 NR2C1P13056 603 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 CPN1P15169 458 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 MSR1P21757 451 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 DCTDP32321 178 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 HIST1H3AP68431 136 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 MADCAM1Q13477 382 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 ZNF124Q15973 351 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 RSPO1Q2MKA7 263 aaPredicted RBP6.47□□□□□ -1.37
SPG11-204ENST00000557866 SPANXN2Q5MJ10 180 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 DDI2Q5TDH0 399 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 HIST2H3PS2Q5TEC6 136 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 TSPO2Q5TGU0 170 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 CNIH2Q6PI25 160 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 STAC2Q6ZMT1 411 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 Q6ZNX1 250 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 HIST2H3AQ71DI3 136 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 LYSMD2Q8IV50 215 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 TUSC5Q8IXB3 177 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 OR5H6Q8NGV6 325 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 GPR148Q8TDV2 347 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 ASB5Q8WWX0 329 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 AP3S1Q92572 193 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 PNPLA2Q96AD5 504 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 FBXO17Q96EF6 278 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 ALKBH3Q96Q83 286 aaPredicted RBP6.47□□□□□ -1.37
SPG11-204ENST00000557866 SCNM1Q9BWG6 230 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 COMMD4Q9H0A8 199 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 NELFAQ9H3P2 528 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 LDAHQ9H6V9 325 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 CRLF2Q9HC73 371 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 GPR35Q9HC97 309 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 DDX28Q9NUL7 540 aaKnown RBP6.47□□□□□ -1.37
SPG11-204ENST00000557866 TMEM38BQ9NVV0 291 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 ZNF319Q9P2F9 582 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 DAPK2Q9UIK4 370 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 CLEC4AQ9UMR7 237 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 GTF2A1LQ9UNN4 478 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 POLR1DQ9Y2S0 133 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 CFAP47Q6ZTR5 3102 aa6.47□□□□□ -1.37
SPG11-204ENST00000557866 DCHS1Q96JQ0 3298 aa6.46□□□□□ -1.37
SPG11-204ENST00000557866 A0A1B0GTI1 187 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 A0A1B0GVC2 190 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 ZNF724A8MTY0 619 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 ZNF878C9JN71 531 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 E9PLN8 166 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 ACOT7O00154 380 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 P2RY10O00398 339 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 SYNGR4O95473 234 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 BPNT1O95861 308 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 TGM6O95932 706 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 TTRP02766 147 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 RAF1P04049 648 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 ISG15P05161 165 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 EIF4EP06730 217 aaKnown RBP6.46□□□□□ -1.38
SPG11-204ENST00000557866 ACSM4P0C7M7 580 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 IGFBP3P17936 291 aaPredicted RBP6.46□□□□□ -1.38
SPG11-204ENST00000557866 ELK1P19419 428 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 ACHEP22303 614 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 CFL1P23528 166 aaKnown RBP6.46□□□□□ -1.38
SPG11-204ENST00000557866 CTSSP25774 331 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 EVX1P49640 407 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 ZNF84P51523 738 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 PRKXP51817 358 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 PPP3R1P63098 170 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 MRPS34P82930 218 aaKnown RBP6.46□□□□□ -1.38
SPG11-204ENST00000557866 BAK1Q16611 211 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 MLANAQ16655 118 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 CEACAM16Q2WEN9 425 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 RIPPLY2Q5TAB7 128 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 BCL2L15Q5TBC7 163 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 FAM27BQ5VT28 67 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 STEAP3Q658P3 488 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 IGFL3Q6UXB1 125 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 DCDC5Q6ZRR9 648 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 PRSS45Q7RTY3 260 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 NUFIP2Q7Z417 695 aaKnown RBP6.46□□□□□ -1.38
SPG11-204ENST00000557866 SIAH3Q8IW03 269 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 ELMOD2Q8IZ81 293 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 CENPSQ8N2Z9 138 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 GPR137CQ8N3F9 429 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 LRRC18Q8N456 261 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 OR2AJ1Q8NGZ0 328 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 FGFBP3Q8TAT2 258 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 TRMT10AQ8TBZ6 339 aaKnown RBP6.46□□□□□ -1.38
SPG11-204ENST00000557866 CPT1CQ8TCG5 803 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 CHPT1Q8WUD6 406 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 ACOT12Q8WYK0 555 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 TMEM106AQ96A25 262 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 DIRAS2Q96HU8 199 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 TAAR6Q96RI8 345 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 SH3GL3Q99963 347 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 SOX7Q9BT81 388 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 PBOV1Q9GZY1 135 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 PPP1R3EQ9H7J1 279 aa6.46□□□□□ -1.38
SPG11-204ENST00000557866 RNF122Q9H9V4 155 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms