RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 OR8D2Q9GZM6 311 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 TLNRD1Q9H1K6 362 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 CNTD2Q9H8S5 307 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 RHBDD3Q9Y3P4 386 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 HS3ST3A1Q9Y663 406 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 A0A0B4J2A0 478 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 TMEM269A0A1B0GVZ9 245 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 PQLC2LA1A4F0 135 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 KCNAB3O43448 404 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 LMX1BO60663 402 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 MPZL1O95297 269 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 IGHMP01871 453 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 IL12BP29460 328 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 SLC22A6Q4U2R8 563 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 IL34Q6ZMJ4 242 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 MRGPRX1Q96LB2 322 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 GAL3ST4Q96RP7 486 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 SEC11CQ9BY50 192 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 ZFP57Q9NU63 452 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 SHPKQ9UHJ6 478 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 CPAMD8Q8IZJ3 1885 aa10.57□□□□□ -0.72
VIPAS39-211ENST00000557658 TMED7-TICAM2A0A0A6YYA0 188 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 P2RY10O00398 339 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 BPNT1O95861 308 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 HOXB1P14653 301 aaPredicted RBP10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 HSD11B1P28845 292 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 RABIFP47224 123 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 PNLIPRP2P54317 469 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 ZP2Q05996 745 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 UNC119Q13432 240 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 ZNF528Q3MIS6 628 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 C1orf140Q5VVS0 124 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 DCXRQ7Z4W1 244 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 TMEM151BQ8IW70 566 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 SLC22A18ASQ8N1D0 253 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 PAQR4Q8N4S7 273 aaPredicted RBP10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 ELP5Q8TE02 316 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 TMED6Q8WW62 240 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 TCTN2Q96GX1 697 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 CYTL1Q9NRR1 136 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 TDRD6O60522 2096 aaKnown RBP10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 A8MVM7 634 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 PLPP3O14495 311 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 GNALP38405 381 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 VEGFBP49765 207 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 GSK3AP49840 483 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 POLR2HP52434 150 aaKnown RBP10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 S100A12P80511 92 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 SRSF3P84103 164 aaKnown RBP10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 TFF2Q03403 129 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 PJVKQ0ZLH3 352 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 DNM1P34Q6PK57 102 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 SLC22A24Q8N4F4 322 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 MARCH1Q8TCQ1 289 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 WNT2BQ93097 391 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 FGGYQ96C11 551 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 RNF126Q9BV68 326 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 TBL1XR1Q9BZK7 514 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 ESRP2Q9H6T0 727 aaKnown RBP10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 UQCC1Q9NVA1 299 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 COA4Q9NYJ1 87 aa10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 TMEM184BQ9Y519 407 aaPredicted RBP10.56□□□□□ -0.72
VIPAS39-211ENST00000557658 NPIPB7O75200 414 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 PMP2P02689 132 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 CTSEP14091 401 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 GNB3P16520 340 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 NPBWR1P48145 328 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 SLC26A5P58743 744 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 AVPI1Q5T686 147 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 AWAT2Q6E213 333 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 DEGS2Q6QHC5 323 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 DRAM2Q6UX65 266 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 HOGA1Q86XE5 327 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 OR4A4PQ8NGN8 299 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 ADIPOR1Q96A54 375 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 MAP3K3Q99759 626 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 USB1Q9BQ65 265 aaKnown RBP10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 UQCC2Q9BRT2 126 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 DZANK1Q9NVP4 752 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 CTSFQ9UBX1 484 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 A0A1W2PQD3 144 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 C17orf51A8MQB3 221 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 ZNF705EA8MWA4 302 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 TMEM150CB9EJG8 249 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 AHSA1O95433 338 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 H2BFMP0C1H6 154 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 VSIG8P0DPA2 414 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 CD1CP29017 333 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 QRFPP83859 136 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 C1orf61Q13536 156 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 TMEM128Q5BJH2 165 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 LINC00346Q8IVM7 164 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 ZSCAN4Q8NAM6 433 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 ZNF248Q8NDW4 579 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 SLC26A10Q8NG04 563 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 OR52N4Q8NGI2 321 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 OR4K15Q8NH41 348 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 ST7LQ8TDW4 575 aa10.55□□□□□ -0.72
VIPAS39-211ENST00000557658 GLYATL2Q8WU03 294 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms