RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 SCN3BQ9NY72 215 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 CISD1Q9NZ45 108 aaKnown RBP12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 BLOC1S6Q9UL45 172 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 ATP23Q9Y6H3 246 aa12.19□□□□□ -0.46
SUPT16H-208ENST00000557652 SMPD2O60906 423 aa12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 KRT8P05787 483 aa12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 MRPL3P09001 348 aaKnown RBP12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 TACSTD2P09758 323 aa12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 ACSM4P0C7M7 580 aa12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 CFL1P23528 166 aaKnown RBP12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 RPS27P42677 84 aaKnown RBP12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 RIDAP52758 137 aaKnown RBP12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 HGFACQ04756 655 aa12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 EFNB3Q15768 340 aa12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 ZNF829Q3KNS6 432 aaPredicted RBP12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 C6orf141Q5SZD1 244 aa12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 AGAP6Q5VW22 663 aa12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 ZNF787Q6DD87 383 aa12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 RGS7BPQ6MZT1 257 aaPredicted RBP12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 TMEM154Q6P9G4 183 aa12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 B3GLCTQ6Y288 498 aa12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 FBXL14Q8N1E6 418 aa12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 SYS1Q8N2H4 156 aa12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 OR10H4Q8NGA5 316 aa12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 CNIH3Q8TBE1 160 aa12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 DOK1Q99704 481 aa12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 YTHDF1Q9BYJ9 559 aaKnown RBP12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 RGCCQ9H4X1 137 aa12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 MOB1AQ9H8S9 216 aa12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 CGGBP1Q9UFW8 167 aaPredicted RBP12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 GPR160Q9UJ42 338 aa12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 TPRKBQ9Y3C4 175 aa12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 CMAHPQ9Y471 501 aa12.18□□□□□ -0.46
SUPT16H-208ENST00000557652 DAPL1A0PJW8 107 aa12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 B9A039 149 aa12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 F5H5K5 113 aa12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 PSKH1P11801 424 aa12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 ZNF250P15622 560 aa12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 CCNOP22674 350 aa12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 MMP16P51512 607 aa12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 PSMA6P60900 246 aaKnown RBP12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 SPOCK1Q08629 439 aa12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 DBPQ10586 325 aaPredicted RBP12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 MALLQ13021 153 aa12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 RSPO1Q2MKA7 263 aaPredicted RBP12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 ZNF718Q3SXZ3 478 aa12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 MBNL2Q5VZF2 373 aaKnown RBP12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 FAM220AQ7Z4H9 259 aa12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 DTX2Q86UW9 622 aa12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 LILRB1Q8NHL6 650 aaPredicted RBP12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 TMEM171Q8WVE6 324 aa12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 CHCHD3Q9NX63 227 aaKnown RBP12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 DIMT1Q9UNQ2 313 aaKnown RBP12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 EXOSC1Q9Y3B2 195 aaKnown RBP12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 GRIP1Q9Y3R0 1128 aa12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 DCHS2Q6V1P9 2916 aa12.17□□□□□ -0.46
SUPT16H-208ENST00000557652 CHD3Q12873 2000 aaKnown RBP12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 CELSR2Q9HCU4 2923 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 HRNRQ86YZ3 2850 aaPredicted RBP12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 A0A1W2PQL4 384 aaPredicted RBP12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 METTL15A6NJ78 407 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 E7EQL1 145 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 XRCC2O43543 280 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 MYL12AP19105 171 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 TTKP33981 857 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 LIPAP38571 399 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 WNT5AP41221 380 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 SLC6A9P48067 706 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 PPP1CBP62140 327 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 GALEQ14376 348 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 CDONQ4KMG0 1287 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 RBM48Q5RL73 367 aaKnown RBP12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 ZNF684Q5T5D7 378 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 RNLSQ5VYX0 342 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 OTPQ5XKR4 325 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 FBXW12Q6X9E4 464 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 MUC15Q8N387 334 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 PAQR4Q8N4S7 273 aaPredicted RBP12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 ZNF283Q8N7M2 679 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 OR52I1Q8NGK6 324 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 OR1J1Q8NGS3 322 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 ABHD4Q8TB40 342 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 SMAP2Q8WU79 429 aaPredicted RBP12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 SNX33Q8WV41 574 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 NINJ1Q92982 152 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 MYDGFQ969H8 173 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 PIGTQ969N2 578 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 MRPL24Q96A35 216 aaKnown RBP12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 TMEM80Q96HE8 168 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 CBLN4Q9NTU7 201 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 SLCO1C1Q9NYB5 712 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 PSORS1C1Q9UIG5 152 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 IKZF2Q9UKS7 526 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 COPS3Q9UNS2 423 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 LRP12Q9Y561 859 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 NAV2Q8IVL1 2488 aa12.16□□□□□ -0.46
SUPT16H-208ENST00000557652 ITPR2Q14571 2701 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 IGLV3-9A0A075B6K5 115 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 SLC1A7O00341 560 aa12.15□□□□□ -0.46
SUPT16H-208ENST00000557652 MRPS14O60783 128 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms