RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 MT-ND5P03915 603 aa11.64□□□□□ -0.55
SHMT2-228ENST00000557302 ACSM4P0C7M7 580 aa11.64□□□□□ -0.55
SHMT2-228ENST00000557302 MPV17P39210 176 aa11.64□□□□□ -0.55
SHMT2-228ENST00000557302 CLEC12BQ2HXU8 276 aa11.64□□□□□ -0.55
SHMT2-228ENST00000557302 RSPO1Q2MKA7 263 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-228ENST00000557302 AADACL4Q5VUY2 407 aa11.64□□□□□ -0.55
SHMT2-228ENST00000557302 SPATC1Q76KD6 591 aa11.64□□□□□ -0.55
SHMT2-228ENST00000557302 MEPCEQ7L2J0 689 aaKnown RBP11.64□□□□□ -0.55
SHMT2-228ENST00000557302 BCDIN3DQ7Z5W3 292 aaKnown RBP11.64□□□□□ -0.55
SHMT2-228ENST00000557302 GID4Q8IVV7 300 aa11.64□□□□□ -0.55
SHMT2-228ENST00000557302 ZCCHC24Q8N2G6 241 aaKnown RBP11.64□□□□□ -0.55
SHMT2-228ENST00000557302 OTOSQ8NHW6 89 aa11.64□□□□□ -0.55
SHMT2-228ENST00000557302 FAM81AQ8TBF8 368 aa11.64□□□□□ -0.55
SHMT2-228ENST00000557302 ZNF799Q96GE5 643 aa11.64□□□□□ -0.55
SHMT2-228ENST00000557302 HRASLS5Q96KN8 279 aa11.64□□□□□ -0.55
SHMT2-228ENST00000557302 ABHD6Q9BV23 337 aa11.64□□□□□ -0.55
SHMT2-228ENST00000557302 TOR3AQ9H497 397 aa11.64□□□□□ -0.55
SHMT2-228ENST00000557302 IMPAD1Q9NX62 359 aa11.64□□□□□ -0.55
SHMT2-228ENST00000557302 STARD10Q9Y365 291 aa11.64□□□□□ -0.55
SHMT2-228ENST00000557302 FLNAP21333 2647 aaKnown RBP11.64□□□□□ -0.55
SHMT2-228ENST00000557302 F12P00748 615 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-228ENST00000557302 LCATP04180 440 aa11.63□□□□□ -0.55
SHMT2-228ENST00000557302 LYNP07948 512 aa11.63□□□□□ -0.55
SHMT2-228ENST00000557302 MRPL3P09001 348 aaKnown RBP11.63□□□□□ -0.55
SHMT2-228ENST00000557302 SLC15A1P46059 708 aa11.63□□□□□ -0.55
SHMT2-228ENST00000557302 SLC6A9P48067 706 aa11.63□□□□□ -0.55
SHMT2-228ENST00000557302 GRB2P62993 217 aaKnown RBP11.63□□□□□ -0.55
SHMT2-228ENST00000557302 ALKBH6Q3KRA9 238 aa11.63□□□□□ -0.55
SHMT2-228ENST00000557302 COLCA1Q6ZS62 124 aa11.63□□□□□ -0.55
SHMT2-228ENST00000557302 SLC16A9Q7RTY1 509 aa11.63□□□□□ -0.55
SHMT2-228ENST00000557302 RNF133Q8WVZ7 376 aa11.63□□□□□ -0.55
SHMT2-228ENST00000557302 NEU4Q8WWR8 484 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-228ENST00000557302 MBOAT4Q96T53 435 aa11.63□□□□□ -0.55
SHMT2-228ENST00000557302 CNN2Q99439 309 aaKnown RBP11.63□□□□□ -0.55
SHMT2-228ENST00000557302 KCNJ15Q99712 375 aa11.63□□□□□ -0.55
SHMT2-228ENST00000557302 C1QTNF5Q9BXJ0 243 aa11.63□□□□□ -0.55
SHMT2-228ENST00000557302 TPK1Q9H3S4 243 aa11.63□□□□□ -0.55
SHMT2-228ENST00000557302 POFUT1Q9H488 388 aa11.63□□□□□ -0.55
SHMT2-228ENST00000557302 PTTG3PQ9NZH4 202 aa11.63□□□□□ -0.55
SHMT2-228ENST00000557302 PLSCR5A0PG75 271 aa11.62□□□□□ -0.55
SHMT2-228ENST00000557302 TIMM8AO60220 97 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-228ENST00000557302 LY6HO94772 140 aa11.62□□□□□ -0.55
SHMT2-228ENST00000557302 CSF3P09919 207 aa11.62□□□□□ -0.55
SHMT2-228ENST00000557302 NAT2P11245 290 aa11.62□□□□□ -0.55
SHMT2-228ENST00000557302 OTX1P32242 354 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-228ENST00000557302 PRKXP51817 358 aa11.62□□□□□ -0.55
SHMT2-228ENST00000557302 DSCR9P59020 149 aa11.62□□□□□ -0.55
SHMT2-228ENST00000557302 ELF3P78545 371 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-228ENST00000557302 PSG7Q13046 419 aa11.62□□□□□ -0.55
SHMT2-228ENST00000557302 GGTLC2Q14390 218 aa11.62□□□□□ -0.55
SHMT2-228ENST00000557302 CLEC2AQ6UVW9 174 aa11.62□□□□□ -0.55
SHMT2-228ENST00000557302 DRAM2Q6UX65 266 aa11.62□□□□□ -0.55
SHMT2-228ENST00000557302 RHOUQ7L0Q8 258 aa11.62□□□□□ -0.55
SHMT2-228ENST00000557302 ZNF283Q8N7M2 679 aa11.62□□□□□ -0.55
SHMT2-228ENST00000557302 THEM6Q8WUY1 208 aa11.62□□□□□ -0.55
SHMT2-228ENST00000557302 TRUB1Q8WWH5 349 aaKnown RBP11.62□□□□□ -0.55
SHMT2-228ENST00000557302 CMBLQ96DG6 245 aa11.62□□□□□ -0.55
SHMT2-228ENST00000557302 RDH12Q96NR8 316 aa11.62□□□□□ -0.55
SHMT2-228ENST00000557302 AMELYQ99218 206 aa11.62□□□□□ -0.55
SHMT2-228ENST00000557302 YIPF3Q9GZM5 350 aa11.62□□□□□ -0.55
SHMT2-228ENST00000557302 C8orf4Q9NR00 106 aa11.62□□□□□ -0.55
SHMT2-228ENST00000557302 CYSLTR2Q9NS75 346 aa11.62□□□□□ -0.55
SHMT2-228ENST00000557302 CGGBP1Q9UFW8 167 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-228ENST00000557302 LAMP5Q9UJQ1 280 aa11.62□□□□□ -0.55
SHMT2-228ENST00000557302 GMPPBQ9Y5P6 360 aa11.62□□□□□ -0.55
SHMT2-228ENST00000557302 ACANP16112 2415 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 TRIM64A6NGJ6 449 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 TRIM64BA6NI03 449 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 C17orf100A8MU93 164 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 E9PQ18 207 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 APOC1P02654 83 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 H2BFMP0C1H6 154 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 CD99P14209 185 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 RAC2P15153 192 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 ALOX5APP20292 161 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 PEX2P28328 305 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 HSD11B1P28845 292 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 LIPAP38571 399 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 OPRL1P41146 370 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 CX3CR1P49238 355 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 MALLQ13021 153 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 HLXQ14774 488 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-228ENST00000557302 LRRC36Q1X8D7 754 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 PCGF3Q3KNV8 242 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 ZMAT1Q5H9K5 638 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 TMEM255AQ5JRV8 349 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 LPCAT4Q643R3 524 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 FBXW12Q6X9E4 464 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 DNM1P46Q6ZS02 220 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 NAA40Q86UY6 237 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-228ENST00000557302 GALNT4Q8N4A0 578 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 ZNF525Q8N782 197 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 PACRGLQ8N7B6 248 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 RFKQ969G6 155 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 HAVCR1Q96D42 359 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 ZNF582Q96NG8 517 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-228ENST00000557302 TMUB1Q9BVT8 246 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 DCLRE1BQ9H816 532 aa11.61□□□□□ -0.55
SHMT2-228ENST00000557302 MYOZ1Q9NP98 299 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms