RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 OR4C13Q8NGP0 309 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 OR2T11Q8NH01 316 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 OR6S1Q8NH40 331 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 OR6X1Q8NH79 312 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 OR5AK3PQ8NH89 298 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 SLC25A40Q8TBP6 338 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 ITLN1Q8WWA0 313 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 TMEM54Q969K7 222 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 CCDC126Q96EE4 140 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 CITED2Q99967 270 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-223ENST00000557076 DPY30Q9C005 99 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 FAM234AQ9H0X4 552 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 SIRPDQ9H106 197 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 TMEM38BQ9NVV0 291 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 TMEM216Q9P0N5 145 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 ERVK-18Q9QC07 812 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 LSM4Q9Y4Z0 139 aaKnown RBP3.82□□□□□ -1.8
SCFD1-223ENST00000557076 STARD9Q9P2P6 4700 aa3.82□□□□□ -1.8
SCFD1-223ENST00000557076 LOC100509620A0A075B734 347 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 A0A087WUJ7 227 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 A0A1B0GVI7 797 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 C5orf49A4QMS7 147 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 LRRC30A6NM36 301 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 NDUFA2O43678 99 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 TIMM8AO60220 97 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-223ENST00000557076 ECDO95905 644 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-223ENST00000557076 DBIP07108 87 aaKnown RBP3.81□□□□□ -1.8
SCFD1-223ENST00000557076 INHBAP08476 426 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 LINC00032P0C843 101 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 NEFHP12036 1026 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 TCP1P17987 556 aaKnown RBP3.81□□□□□ -1.8
SCFD1-223ENST00000557076 KITLGP21583 273 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 CCNOP22674 350 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 EEF1B2P24534 225 aaKnown RBP3.81□□□□□ -1.8
SCFD1-223ENST00000557076 CSNK1A1P48729 337 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 ARHGDIAP52565 204 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 PLTPP55058 493 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 PPP1CBP62140 327 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 ARF6P62330 175 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 TXNL4AP83876 142 aaKnown RBP3.81□□□□□ -1.8
SCFD1-223ENST00000557076 PUDPQ08623 228 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 FUT5Q11128 374 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 AANATQ16613 207 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 SMU1Q2TAY7 513 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 ZNF260Q3ZCT1 412 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 CDONQ4KMG0 1287 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 GPAT3Q53EU6 434 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 PABPC1L2AQ5JQF8 200 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 LIPMQ5VYY2 423 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 ATG16L1Q676U5 607 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 TNFAIP8L2Q6P589 184 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-223ENST00000557076 ARL9Q6T311 187 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 LYPD2Q6UXB3 125 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 UNQ9370/PRO34162Q6UXP9 181 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 LRRC74BQ6ZQY2 392 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 Q6ZR03 302 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 HMGN2P46Q86SG4 172 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 FAM90A1Q86YD7 464 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 PEX5LQ8IYB4 626 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 C1orf87Q8N0U7 546 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 CLEC4FQ8N1N0 589 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 Q8N2B8 174 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 CADM2Q8N3J6 435 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 CCNYL1Q8N7R7 359 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 SCAIQ8N9R8 606 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 RBM15BQ8NDT2 890 aaKnown RBP3.81□□□□□ -1.8
SCFD1-223ENST00000557076 Q8NFD4 153 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 OR4K5Q8NGD3 323 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 NSMAFQ92636 917 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 HAVCR1Q96D42 359 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 RBMXL1Q96E39 390 aaKnown RBP3.81□□□□□ -1.8
SCFD1-223ENST00000557076 SLC25A44Q96H78 314 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-223ENST00000557076 MAELQ96JY0 434 aaKnown RBP3.81□□□□□ -1.8
SCFD1-223ENST00000557076 SLC35G5Q96KT7 338 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 OR2V2Q96R30 315 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 ZNF607Q96SK3 696 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 NAPGQ99747 312 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-223ENST00000557076 CHID1Q9BWS9 393 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 FUT8Q9BYC5 575 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 NPFFR1Q9GZQ6 430 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 SLC38A1Q9H2H9 487 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 TUBB1Q9H4B7 451 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 SIAEQ9HAT2 523 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 ELOVL3Q9HB03 270 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 C12orf10Q9HB07 376 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 PALMDQ9NP74 551 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 ZNF580Q9UK33 172 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 KPTNQ9Y664 436 aa3.81□□□□□ -1.8
SCFD1-223ENST00000557076 TRAV36DV7A0A075B6V5 113 aa3.8□□□□□ -1.8
SCFD1-223ENST00000557076 RNF103-CHMP3A0A140T963 221 aa3.8□□□□□ -1.8
SCFD1-223ENST00000557076 PRSS51A0A1B0GVH4 220 aa3.8□□□□□ -1.8
SCFD1-223ENST00000557076 RBMY1BA6NDE4 496 aaKnown RBP3.8□□□□□ -1.8
SCFD1-223ENST00000557076 RBMY1EA6NEQ0 496 aaKnown RBP3.8□□□□□ -1.8
SCFD1-223ENST00000557076 PRSS29PA6NIE9 313 aa3.8□□□□□ -1.8
SCFD1-223ENST00000557076 HMGN4O00479 90 aa3.8□□□□□ -1.8
SCFD1-223ENST00000557076 FBP2O00757 339 aa3.8□□□□□ -1.8
SCFD1-223ENST00000557076 PLPP3O14495 311 aa3.8□□□□□ -1.8
SCFD1-223ENST00000557076 AZIN1O14977 448 aa3.8□□□□□ -1.8
SCFD1-223ENST00000557076 RAMP3O60896 148 aa3.8□□□□□ -1.8
SCFD1-223ENST00000557076 CYB5R3P00387 301 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms