RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 TDRD15B5MCY1 1934 aaKnown RBP4.51□□□□□ -1.69
SYNE2-223ENST00000557005 FAM221AA4D161 298 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 HMSDA8MTL9 139 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 HCRTR1O43613 425 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 MYOGP15173 224 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 HOXB9P17482 250 aaPredicted RBP4.51□□□□□ -1.69
SYNE2-223ENST00000557005 CSNK1A1P48729 337 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 DHPSP49366 369 aaPredicted RBP4.51□□□□□ -1.69
SYNE2-223ENST00000557005 SLC35A1P78382 337 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 DPTQ07507 201 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 TMEM267Q0VDI3 215 aaPredicted RBP4.51□□□□□ -1.69
SYNE2-223ENST00000557005 RIN1Q13671 783 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 SERTAD2Q14140 314 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 MLF2Q15773 248 aaPredicted RBP4.51□□□□□ -1.69
SYNE2-223ENST00000557005 SLC25A30Q5SVS4 291 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 SHEQ5VZ18 495 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 GLRX5Q86SX6 157 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF595Q8IYB9 648 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF561Q8N587 486 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 ARIH2OSQ8N7S6 290 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 IL1F10Q8WWZ1 152 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 PATE1Q8WXA2 126 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 SLAMF6Q96DU3 332 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 RHOVQ96L33 236 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 MRGPRX3Q96LB0 322 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 BMFQ96LC9 184 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 LINC00615Q96LM1 132 aaPredicted RBP4.51□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF286AQ9HBT8 521 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF175Q9Y473 711 aa4.51□□□□□ -1.69
SYNE2-223ENST00000557005 ZNF638Q14966 1978 aaKnown RBP4.51□□□□□ -1.69
SYNE2-223ENST00000557005 PRSS37A4D1T9 235 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 SHISA8B8ZZ34 492 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 TAAR5O14804 337 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 SPRY1O43609 319 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-223ENST00000557005 EIF3GO75821 320 aaKnown RBP eCLIP4.5□□□□□ -1.69
SYNE2-223ENST00000557005 MPZL1O95297 269 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 SERPINA7P05543 415 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 HOXD4P09016 255 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-223ENST00000557005 CPN1P15169 458 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 TSFMP43897 325 aaKnown RBP4.5□□□□□ -1.69
SYNE2-223ENST00000557005 KCNJ3P48549 501 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 RAB11AP62491 216 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 FABP9Q0Z7S8 132 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 FUT5Q11128 374 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 DHRS2Q13268 280 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 TUSC1Q2TAM9 212 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 MOGAT2Q3SYC2 334 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 C9orf135Q5VTT2 229 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 KCNIP4Q6PIL6 250 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 PRSS41Q7RTY9 318 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 PRSS35Q8N3Z0 413 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 EXD3Q8N9H8 876 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 AVL9Q8NBF6 648 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 OR5AP2Q8NGF4 316 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 SECTM1Q8WVN6 248 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 C2orf50Q96LR7 162 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 EMC6Q9BV81 110 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 TOLLIPQ9H0E2 274 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 SLCO5A1Q9H2Y9 848 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 NKX2-4Q9H2Z4 354 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 C1orf198Q9H425 327 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 CA14Q9ULX7 337 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 MRPS2Q9Y399 296 aaKnown RBP4.5□□□□□ -1.69
SYNE2-223ENST00000557005 LCTP09848 1927 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 TSC2P49815 1807 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 MYO18AQ92614 2054 aaKnown RBP4.5□□□□□ -1.69
SYNE2-223ENST00000557005 IGHV3-15A0A0B4J1V0 119 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 RAB27BO00194 218 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 MSTNO14793 375 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 GPR137BO60478 399 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 CYTIPO60759 359 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 OR2J2O76002 312 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 HLA-DQB1P01920 261 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 CRYBA1P05813 215 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 CT62P0C5K7 136 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 GABRA1P14867 456 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 DUSP1P28562 367 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 CALCRP30988 508 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 CD96P40200 585 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 CDKN2AP42771 156 aaKnown RBP4.5□□□□□ -1.69
SYNE2-223ENST00000557005 MTCP1P56278 107 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 GABREP78334 506 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 HTD2P86397 168 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 INPP5JQ15735 1006 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-223ENST00000557005 ACKR1Q16570 336 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 PRICKLE4Q2TBC4 344 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 OR2A2Q6IF42 318 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 DPPA2Q7Z7J5 298 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 CDC20BQ86Y33 519 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 LINC00518Q8N0U6 118 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 GPR137CQ8N3F9 429 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 C15orf54Q8N8G6 183 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 OR9K2Q8NGE7 335 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 OR2G2Q8NGZ5 317 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 STT3BQ8TCJ2 826 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 SFT2D1Q8WV19 159 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 EDAQ92838 391 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 MR1Q95460 341 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 ISOC2Q96AB3 205 aa4.5□□□□□ -1.69
SYNE2-223ENST00000557005 LRFN5Q96NI6 719 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms