RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 SYNGR3O43761 229 aa20.73■□□□□ 0.91
SIX4-203ENST00000556952 PNPP00491 289 aa20.73■□□□□ 0.91
SIX4-203ENST00000556952 APOC1P02654 83 aa20.73■□□□□ 0.91
SIX4-203ENST00000556952 RNF224P0DH78 156 aa20.73■□□□□ 0.91
SIX4-203ENST00000556952 PSG4Q00888 419 aa20.73■□□□□ 0.91
SIX4-203ENST00000556952 P2RY6Q15077 328 aa20.73■□□□□ 0.91
SIX4-203ENST00000556952 C4orf17Q53FE4 359 aa20.73■□□□□ 0.91
SIX4-203ENST00000556952 TMEM211Q6ICI0 200 aa20.73■□□□□ 0.91
SIX4-203ENST00000556952 NCCRP1Q6ZVX7 275 aaPredicted RBP20.73■□□□□ 0.91
SIX4-203ENST00000556952 CCDC36Q8IYA8 594 aa20.73■□□□□ 0.91
SIX4-203ENST00000556952 ZNF433Q8N7K0 673 aaPredicted RBP20.73■□□□□ 0.91
SIX4-203ENST00000556952 SPTSSAQ969W0 71 aa20.73■□□□□ 0.91
SIX4-203ENST00000556952 TXNL4BQ9NX01 149 aaKnown RBP20.73■□□□□ 0.91
SIX4-203ENST00000556952 ZNF629Q9UEG4 869 aaPredicted RBP20.73■□□□□ 0.91
SIX4-203ENST00000556952 GSTK1Q9Y2Q3 226 aa20.73■□□□□ 0.91
SIX4-203ENST00000556952 OR6C6A6NF89 314 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 SC5DO75845 299 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 OTX1P32242 354 aaPredicted RBP20.72■□□□□ 0.91
SIX4-203ENST00000556952 ARR3P36575 388 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 KIR3DL2P43630 455 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 USP43Q70EL4 1123 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 ZNF610Q8N9Z0 462 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 IL17RDQ8NFM7 739 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 KBTBD8Q8NFY9 601 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 OR1F12Q8NHA8 337 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 FGFBP3Q8TAT2 258 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 TRMT61AQ96FX7 289 aaKnown RBP20.72■□□□□ 0.91
SIX4-203ENST00000556952 HDHD5Q9BXW7 423 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 WNT5BQ9H1J7 359 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 OPN3Q9H1Y3 402 aaPredicted RBP20.72■□□□□ 0.91
SIX4-203ENST00000556952 PIGMQ9H3S5 423 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 RNF121Q9H920 327 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 G6PC2Q9NQR9 355 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 OR52A1Q9UKL2 312 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 GTF2A1LQ9UNN4 478 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 CCL21O00585 134 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 PATE4P0C8F1 98 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 HOXB1P14653 301 aaPredicted RBP20.72■□□□□ 0.91
SIX4-203ENST00000556952 CX3CR1P49238 355 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 SPCS2Q15005 226 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 TBRG1Q3YBR2 411 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 BCL2L15Q5TBC7 163 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 ZNF774Q6NX45 483 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 TMEM53Q6P2H8 277 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 ZNF676Q8N7Q3 588 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 ABHD4Q8TB40 342 aa20.72■□□□□ 0.91
SIX4-203ENST00000556952 A0A0G2JNJ9 132 aa20.71■□□□□ 0.91
SIX4-203ENST00000556952 CIB4A0PJX0 185 aa20.71■□□□□ 0.91
SIX4-203ENST00000556952 ACOD1A6NK06 481 aa20.71■□□□□ 0.91
SIX4-203ENST00000556952 MSTNO14793 375 aa20.71■□□□□ 0.91
SIX4-203ENST00000556952 CRYGSP22914 178 aa20.71■□□□□ 0.91
SIX4-203ENST00000556952 UGT2B10P36537 528 aa20.71■□□□□ 0.91
SIX4-203ENST00000556952 GABRA6Q16445 453 aa20.71■□□□□ 0.91
SIX4-203ENST00000556952 HIKESHIQ53FT3 197 aa20.71■□□□□ 0.91
SIX4-203ENST00000556952 TMEM91Q6ZNR0 172 aa20.71■□□□□ 0.91
SIX4-203ENST00000556952 ZNF283Q8N7M2 679 aa20.71■□□□□ 0.91
SIX4-203ENST00000556952 AKR7LQ8NHP1 331 aa20.71■□□□□ 0.91
SIX4-203ENST00000556952 NDNFQ8TB73 568 aa20.71■□□□□ 0.91
SIX4-203ENST00000556952 DMRTA2Q96SC8 542 aa20.71■□□□□ 0.91
SIX4-203ENST00000556952 PTTG2Q9NZH5 202 aa20.71■□□□□ 0.91
SIX4-203ENST00000556952 Q9UFV3 132 aa20.71■□□□□ 0.91
SIX4-203ENST00000556952 NUFIP1Q9UHK0 495 aaKnown RBP20.71■□□□□ 0.91
SIX4-203ENST00000556952 UTP20O75691 2785 aaKnown RBP20.7■□□□□ 0.9
SIX4-203ENST00000556952 ARPC4-TTLL3A0A0A6YYG9 625 aa20.7■□□□□ 0.9
SIX4-203ENST00000556952 A0A1B0GUH1 482 aa20.7■□□□□ 0.9
SIX4-203ENST00000556952 A0A1W2PPW3 197 aa20.7■□□□□ 0.9
SIX4-203ENST00000556952 RAD51DO75771 328 aa20.7■□□□□ 0.9
SIX4-203ENST00000556952 GATBO75879 557 aaKnown RBP20.7■□□□□ 0.9
SIX4-203ENST00000556952 LYZL6O75951 148 aa20.7■□□□□ 0.9
SIX4-203ENST00000556952 AGFG2O95081 481 aa20.7■□□□□ 0.9
SIX4-203ENST00000556952 HLA-HP01893 362 aa20.7■□□□□ 0.9
SIX4-203ENST00000556952 UBCP0CG48 685 aaKnown RBP20.7■□□□□ 0.9
SIX4-203ENST00000556952 COX5BP10606 129 aa20.7■□□□□ 0.9
SIX4-203ENST00000556952 HTR5AP47898 357 aa20.7■□□□□ 0.9
SIX4-203ENST00000556952 PRKXP51817 358 aa20.7■□□□□ 0.9
SIX4-203ENST00000556952 RPS11P62280 158 aaKnown RBP eCLIP20.7■□□□□ 0.9
SIX4-203ENST00000556952 KRTAP27-1Q3LI81 207 aa20.7■□□□□ 0.9
SIX4-203ENST00000556952 PABPC1L2AQ5JQF8 200 aa20.7■□□□□ 0.9
SIX4-203ENST00000556952 C22orf42Q6IC83 251 aa20.7■□□□□ 0.9
SIX4-203ENST00000556952 PAMR1Q6UXH9 720 aa20.7■□□□□ 0.9
SIX4-203ENST00000556952 ZNF704Q6ZNC4 412 aaPredicted RBP20.7■□□□□ 0.9
SIX4-203ENST00000556952 C17orf78Q8N4C9 275 aa20.7■□□□□ 0.9
SIX4-203ENST00000556952 KCTD7Q96MP8 289 aa20.7■□□□□ 0.9
SIX4-203ENST00000556952 DCLRE1CQ96SD1 692 aaKnown RBP20.7■□□□□ 0.9
SIX4-203ENST00000556952 M0R135 149 aa20.69■□□□□ 0.9
SIX4-203ENST00000556952 ISG15P05161 165 aa20.69■□□□□ 0.9
SIX4-203ENST00000556952 CD79AP11912 226 aa20.69■□□□□ 0.9
SIX4-203ENST00000556952 ZNF121P58317 390 aaPredicted RBP20.69■□□□□ 0.9
SIX4-203ENST00000556952 GALK2Q01415 458 aa20.69■□□□□ 0.9
SIX4-203ENST00000556952 ACSM3Q53FZ2 586 aa20.69■□□□□ 0.9
SIX4-203ENST00000556952 RGP1Q92546 391 aaPredicted RBP20.69■□□□□ 0.9
SIX4-203ENST00000556952 PHYHIPQ92561 330 aa20.69■□□□□ 0.9
SIX4-203ENST00000556952 THRSPQ92748 146 aa20.69■□□□□ 0.9
SIX4-203ENST00000556952 ZNF799Q96GE5 643 aa20.69■□□□□ 0.9
SIX4-203ENST00000556952 PBOV1Q9GZY1 135 aa20.69■□□□□ 0.9
SIX4-203ENST00000556952 DCSTAMPQ9H295 470 aa20.69■□□□□ 0.9
SIX4-203ENST00000556952 RNF167Q9H6Y7 350 aa20.69■□□□□ 0.9
SIX4-203ENST00000556952 SLC22A13Q9Y226 551 aa20.69■□□□□ 0.9
SIX4-203ENST00000556952 MEMO1Q9Y316 297 aa20.69■□□□□ 0.9
SIX4-203ENST00000556952 DOPEY1Q5JWR5 2465 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms