RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 CGB2Q6NT52 195 aa15.26■□□□□ 0.03
VIPAS39-209ENST00000556909 CBLL1Q75N03 491 aa15.26■□□□□ 0.03
VIPAS39-209ENST00000556909 RRM2BQ7LG56 351 aa15.26■□□□□ 0.03
VIPAS39-209ENST00000556909 NLRC3Q7RTR2 1065 aa15.26■□□□□ 0.03
VIPAS39-209ENST00000556909 ADCK1Q86TW2 530 aa15.26■□□□□ 0.03
VIPAS39-209ENST00000556909 C1orf87Q8N0U7 546 aa15.26■□□□□ 0.03
VIPAS39-209ENST00000556909 FITM2Q8N6M3 262 aa15.26■□□□□ 0.03
VIPAS39-209ENST00000556909 SLC7A13Q8TCU3 470 aa15.26■□□□□ 0.03
VIPAS39-209ENST00000556909 RCN3Q96D15 328 aa15.26■□□□□ 0.03
VIPAS39-209ENST00000556909 HDHD2Q9H0R4 259 aa15.26■□□□□ 0.03
VIPAS39-209ENST00000556909 WDR76Q9H967 626 aa15.26■□□□□ 0.03
VIPAS39-209ENST00000556909 LHFPL6Q9Y693 200 aa15.26■□□□□ 0.03
VIPAS39-209ENST00000556909 SRRM5B3KS81 715 aa15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 PTP4A3O75365 173 aa15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 HLA-DPB1P04440 258 aa15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 PRSS12P56730 875 aa15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 FXYD6P3P58550 94 aa15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 HIST1H3AP68431 136 aa15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 LIPEQ05469 1076 aa15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 MEP1BQ16820 701 aa15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 MIDNQ504T8 468 aa15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 HIST2H3PS2Q5TEC6 136 aa15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 HIST2H3AQ71DI3 136 aa15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 FKBP9P1Q75LS8 142 aa15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 TSEN54Q7Z6J9 526 aaKnown RBP15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 ARPINQ7Z6K5 226 aa15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 SLC15A3Q8IY34 581 aa15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 GJC3Q8NFK1 279 aa15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 WFDC12Q8WWY7 111 aa15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 RSRC1Q96IZ7 334 aaKnown RBP15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 CDADC1Q9BWV3 514 aa15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 PRDM13Q9H4Q3 707 aa15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 FGFR1OP2Q9NVK5 253 aa15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 CLN8Q9UBY8 286 aa15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 AP3M1Q9Y2T2 418 aa15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 CAPN7Q9Y6W3 813 aa15.25■□□□□ 0.03
VIPAS39-209ENST00000556909 FAM181BA6NEQ2 426 aa15.24■□□□□ 0.03
VIPAS39-209ENST00000556909 DCTN6O00399 190 aa15.24■□□□□ 0.03
VIPAS39-209ENST00000556909 PHYHO14832 338 aa15.24■□□□□ 0.03
VIPAS39-209ENST00000556909 SERPINA1P01009 418 aa15.24■□□□□ 0.03
VIPAS39-209ENST00000556909 GATA4P43694 442 aa15.24■□□□□ 0.03
VIPAS39-209ENST00000556909 FGF12P61328 243 aa15.24■□□□□ 0.03
VIPAS39-209ENST00000556909 SRSF4Q08170 494 aaKnown RBP15.24■□□□□ 0.03
VIPAS39-209ENST00000556909 WDR25Q64LD2 544 aaPredicted RBP15.24■□□□□ 0.03
VIPAS39-209ENST00000556909 PGM2L1Q6PCE3 622 aa15.24■□□□□ 0.03
VIPAS39-209ENST00000556909 CORO6Q6QEF8 472 aa15.24■□□□□ 0.03
VIPAS39-209ENST00000556909 LYPD2Q6UXB3 125 aa15.24■□□□□ 0.03
VIPAS39-209ENST00000556909 DCDC5Q6ZRR9 648 aa15.24■□□□□ 0.03
VIPAS39-209ENST00000556909 COLCA1Q6ZS62 124 aa15.24■□□□□ 0.03
VIPAS39-209ENST00000556909 CYP4Z1Q86W10 505 aa15.24■□□□□ 0.03
VIPAS39-209ENST00000556909 ZDHHC16Q969W1 377 aa15.24■□□□□ 0.03
VIPAS39-209ENST00000556909 TSSK2Q96PF2 358 aa15.24■□□□□ 0.03
VIPAS39-209ENST00000556909 TMEM100Q9NV29 134 aa15.24■□□□□ 0.03
VIPAS39-209ENST00000556909 IER3IP1Q9Y5U9 82 aa15.24■□□□□ 0.03
VIPAS39-209ENST00000556909 ENPP4Q9Y6X5 453 aa15.24■□□□□ 0.03
VIPAS39-209ENST00000556909 C22orf46C9J442 243 aa15.23■□□□□ 0.03
VIPAS39-209ENST00000556909 NME4O00746 187 aa15.23■□□□□ 0.03
VIPAS39-209ENST00000556909 GSTA4O15217 222 aa15.23■□□□□ 0.03
VIPAS39-209ENST00000556909 TXNDC12O95881 172 aa15.23■□□□□ 0.03
VIPAS39-209ENST00000556909 IRF2P14316 349 aa15.23■□□□□ 0.03
VIPAS39-209ENST00000556909 FPR3P25089 353 aa15.23■□□□□ 0.03
VIPAS39-209ENST00000556909 CDKN2AP42771 156 aaKnown RBP15.23■□□□□ 0.03
VIPAS39-209ENST00000556909 OMPP47874 163 aa15.23■□□□□ 0.03
VIPAS39-209ENST00000556909 RAG2P55895 527 aa15.23■□□□□ 0.03
VIPAS39-209ENST00000556909 COX10Q12887 443 aa15.23■□□□□ 0.03
VIPAS39-209ENST00000556909 RSPO1Q2MKA7 263 aaPredicted RBP15.23■□□□□ 0.03
VIPAS39-209ENST00000556909 KRTAP27-1Q3LI81 207 aa15.23■□□□□ 0.03
VIPAS39-209ENST00000556909 GPR157Q5UAW9 335 aa15.23■□□□□ 0.03
VIPAS39-209ENST00000556909 ZNF841Q6ZN19 808 aa15.23■□□□□ 0.03
VIPAS39-209ENST00000556909 HDXQ7Z353 690 aa15.23■□□□□ 0.03
VIPAS39-209ENST00000556909 C19orf18Q8NEA5 215 aa15.23■□□□□ 0.03
VIPAS39-209ENST00000556909 Q8TCH9 128 aa15.23■□□□□ 0.03
VIPAS39-209ENST00000556909 HCAR1Q9BXC0 346 aa15.23■□□□□ 0.03
VIPAS39-209ENST00000556909 MARCH7Q9H992 704 aa15.23■□□□□ 0.03
VIPAS39-209ENST00000556909 TNFRSF19Q9NS68 423 aa15.23■□□□□ 0.03
VIPAS39-209ENST00000556909 ARMCX1Q9P291 453 aa15.23■□□□□ 0.03
VIPAS39-209ENST00000556909 RPS6KA6Q9UK32 745 aa15.23■□□□□ 0.03
VIPAS39-209ENST00000556909 IGLV1-36A0A0B4J1U3 117 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 A0A1B0GUS0 222 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 A0A1W2PRQ8 180 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 ENSAO43768 121 aaKnown RBP15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 FAM20BO75063 409 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 KNG1P01042 644 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 H1F0P07305 194 aaKnown RBP15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 CRABP1P29762 137 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 CD200P41217 278 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 CENPAP49450 140 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 RPS6KA3P51812 740 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 SLC7A2P52569 658 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 RAD23AP54725 363 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 MAB21L1Q13394 359 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 DGCR6Q14129 220 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 GK2Q14410 553 aaPredicted RBP15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 OCLNQ16625 522 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 FGD3Q5JSP0 725 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 CLEC12AQ5QGZ9 265 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 RUSC1-AS1Q66K80 236 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 DNM1P34Q6PK57 102 aa15.22■□□□□ 0.03
VIPAS39-209ENST00000556909 FIP1L1Q6UN15 594 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms