RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 INTS14Q96SY0 518 aa19.49■□□□□ 0.71
TDP1-216ENST00000556867 BPESC1Q9GZL8 116 aa19.49■□□□□ 0.71
TDP1-216ENST00000556867 OR51V1Q9H2C8 321 aa19.49■□□□□ 0.71
TDP1-216ENST00000556867 SEMA6AQ9H2E6 1030 aa19.49■□□□□ 0.71
TDP1-216ENST00000556867 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.49■□□□□ 0.71
TDP1-216ENST00000556867 PURGQ9UJV8 347 aaKnown RBP19.49■□□□□ 0.71
TDP1-216ENST00000556867 NF1P21359 2839 aa19.48■□□□□ 0.71
TDP1-216ENST00000556867 FN1P02751 2386 aaKnown RBP19.48■□□□□ 0.71
TDP1-216ENST00000556867 ZSCAN5BA6NJL1 495 aa19.48■□□□□ 0.71
TDP1-216ENST00000556867 F5H5K5 113 aa19.48■□□□□ 0.71
TDP1-216ENST00000556867 H3BNX3 289 aa19.48■□□□□ 0.71
TDP1-216ENST00000556867 TIMM8AO60220 97 aaPredicted RBP19.48■□□□□ 0.71
TDP1-216ENST00000556867 MITFO75030 526 aaPredicted RBP19.48■□□□□ 0.71
TDP1-216ENST00000556867 ADH4P08319 380 aa19.48■□□□□ 0.71
TDP1-216ENST00000556867 RAC2P15153 192 aa19.48■□□□□ 0.71
TDP1-216ENST00000556867 GSTT1P30711 240 aa19.48■□□□□ 0.71
TDP1-216ENST00000556867 OTX1P32242 354 aaPredicted RBP19.48■□□□□ 0.71
TDP1-216ENST00000556867 RIN1Q13671 783 aa19.48■□□□□ 0.71
TDP1-216ENST00000556867 PTGES3Q15185 160 aaKnown RBP19.48■□□□□ 0.71
TDP1-216ENST00000556867 ZMAT1Q5H9K5 638 aa19.48■□□□□ 0.71
TDP1-216ENST00000556867 FAM209AQ5JX71 171 aa19.48■□□□□ 0.71
TDP1-216ENST00000556867 FBXW12Q6X9E4 464 aa19.48■□□□□ 0.71
TDP1-216ENST00000556867 CPOQ8IVL8 374 aa19.48■□□□□ 0.71
TDP1-216ENST00000556867 ST7LQ8TDW4 575 aa19.48■□□□□ 0.71
TDP1-216ENST00000556867 SPTSSAQ969W0 71 aa19.48■□□□□ 0.71
TDP1-216ENST00000556867 CMBLQ96DG6 245 aa19.48■□□□□ 0.71
TDP1-216ENST00000556867 CHODLQ9H9P2 273 aa19.48■□□□□ 0.71
TDP1-216ENST00000556867 ENOPH1Q9UHY7 261 aa19.48■□□□□ 0.71
TDP1-216ENST00000556867 OAZ3Q9UMX2 235 aa19.48■□□□□ 0.71
TDP1-216ENST00000556867 NIPBLQ6KC79 2804 aaeCLIP19.47■□□□□ 0.71
TDP1-216ENST00000556867 LYNX1G3V0Z9 82 aa19.47■□□□□ 0.71
TDP1-216ENST00000556867 IGHV1-46P01743 117 aa19.47■□□□□ 0.71
TDP1-216ENST00000556867 LYNX1P0DP58 116 aa19.47■□□□□ 0.71
TDP1-216ENST00000556867 ACHEP22303 614 aa19.47■□□□□ 0.71
TDP1-216ENST00000556867 TPTEP56180 551 aa19.47■□□□□ 0.71
TDP1-216ENST00000556867 RIPPLY3P57055 190 aa19.47■□□□□ 0.71
TDP1-216ENST00000556867 CCL8P80075 99 aa19.47■□□□□ 0.71
TDP1-216ENST00000556867 GGTLC2Q14390 218 aa19.47■□□□□ 0.71
TDP1-216ENST00000556867 SNAPC1Q16533 368 aa19.47■□□□□ 0.71
TDP1-216ENST00000556867 TMEM249Q2WGJ8 235 aa19.47■□□□□ 0.71
TDP1-216ENST00000556867 ERI1Q8IV48 349 aaKnown RBP19.47■□□□□ 0.71
TDP1-216ENST00000556867 TIGD4Q8IY51 512 aa19.47■□□□□ 0.71
TDP1-216ENST00000556867 OR6N2Q8NGY6 317 aa19.47■□□□□ 0.71
TDP1-216ENST00000556867 SLAMF6Q96DU3 332 aa19.47■□□□□ 0.71
TDP1-216ENST00000556867 RAB3IPQ96QF0 476 aaPredicted RBP19.47■□□□□ 0.71
TDP1-216ENST00000556867 PRRG3Q9BZD7 231 aa19.47■□□□□ 0.71
TDP1-216ENST00000556867 TVP23BQ9NYZ1 205 aa19.47■□□□□ 0.71
TDP1-216ENST00000556867 PTTG3PQ9NZH4 202 aa19.47■□□□□ 0.71
TDP1-216ENST00000556867 TMEFF2Q9UIK5 374 aaPredicted RBP19.47■□□□□ 0.71
TDP1-216ENST00000556867 M0R135 149 aa19.46■□□□□ 0.71
TDP1-216ENST00000556867 SLC2A5P22732 501 aa19.46■□□□□ 0.71
TDP1-216ENST00000556867 IGFBP5P24593 272 aa19.46■□□□□ 0.71
TDP1-216ENST00000556867 PPP2R2BQ00005 443 aa19.46■□□□□ 0.71
TDP1-216ENST00000556867 SLC35D3Q5M8T2 416 aa19.46■□□□□ 0.71
TDP1-216ENST00000556867 SLX4IPQ5VYV7 408 aa19.46■□□□□ 0.71
TDP1-216ENST00000556867 CXXC5Q7LFL8 322 aaKnown RBP19.46■□□□□ 0.71
TDP1-216ENST00000556867 DPY19L4Q7Z388 723 aa19.46■□□□□ 0.71
TDP1-216ENST00000556867 C10orf67Q8IYJ2 551 aa19.46■□□□□ 0.71
TDP1-216ENST00000556867 BBS1Q8NFJ9 593 aa19.46■□□□□ 0.71
TDP1-216ENST00000556867 YIPF5Q969M3 257 aa19.46■□□□□ 0.71
TDP1-216ENST00000556867 ZMYND19Q96E35 227 aaPredicted RBP19.46■□□□□ 0.71
TDP1-216ENST00000556867 ZNF799Q96GE5 643 aa19.46■□□□□ 0.71
TDP1-216ENST00000556867 DIRC2Q96SL1 478 aa19.46■□□□□ 0.71
TDP1-216ENST00000556867 PKP2Q99959 881 aa19.46■□□□□ 0.71
TDP1-216ENST00000556867 OSBPL10Q9BXB5 764 aa19.46■□□□□ 0.71
TDP1-216ENST00000556867 ZDHHC8Q9ULC8 765 aa19.46■□□□□ 0.71
TDP1-216ENST00000556867 IGHV4-61A0A0C4DH41 118 aa19.45■□□□□ 0.7
TDP1-216ENST00000556867 ZAR1LA6NP61 321 aa19.45■□□□□ 0.7
TDP1-216ENST00000556867 ZNF878C9JN71 531 aa19.45■□□□□ 0.7
TDP1-216ENST00000556867 SPRY3O43610 288 aa19.45■□□□□ 0.7
TDP1-216ENST00000556867 RP2O75695 350 aa19.45■□□□□ 0.7
TDP1-216ENST00000556867 COL8A2P25067 703 aa19.45■□□□□ 0.7
TDP1-216ENST00000556867 HLXQ14774 488 aaPredicted RBP19.45■□□□□ 0.7
TDP1-216ENST00000556867 KLHL12Q53G59 568 aa19.45■□□□□ 0.7
TDP1-216ENST00000556867 SHFQ7M4L6 423 aa19.45■□□□□ 0.7
TDP1-216ENST00000556867 CIB1Q99828 191 aa19.45■□□□□ 0.7
TDP1-216ENST00000556867 COPS4Q9BT78 406 aa19.45■□□□□ 0.7
TDP1-216ENST00000556867 SAP30LQ9HAJ7 183 aa19.45■□□□□ 0.7
TDP1-216ENST00000556867 MSL2Q9HCI7 577 aa19.45■□□□□ 0.7
TDP1-216ENST00000556867 DECR2Q9NUI1 292 aa19.45■□□□□ 0.7
TDP1-216ENST00000556867 SONP18583 2426 aaKnown RBP19.45■□□□□ 0.7
TDP1-216ENST00000556867 SAC3D1A6NKF1 404 aa19.44■□□□□ 0.7
TDP1-216ENST00000556867 CD5LO43866 347 aa19.44■□□□□ 0.7
TDP1-216ENST00000556867 LCATP04180 440 aa19.44■□□□□ 0.7
TDP1-216ENST00000556867 CD55P08174 381 aa19.44■□□□□ 0.7
TDP1-216ENST00000556867 TACSTD2P09758 323 aa19.44■□□□□ 0.7
TDP1-216ENST00000556867 EPHA2P29317 976 aa19.44■□□□□ 0.7
TDP1-216ENST00000556867 CDK5R2Q13319 367 aa19.44■□□□□ 0.7
TDP1-216ENST00000556867 EIF2B1Q14232 305 aaKnown RBP19.44■□□□□ 0.7
TDP1-216ENST00000556867 TSTQ16762 297 aaKnown RBP19.44■□□□□ 0.7
TDP1-216ENST00000556867 C12orf73Q69YU5 71 aa19.44■□□□□ 0.7
TDP1-216ENST00000556867 DRAM2Q6UX65 266 aa19.44■□□□□ 0.7
TDP1-216ENST00000556867 NAA40Q86UY6 237 aa19.44■□□□□ 0.7
TDP1-216ENST00000556867 KCNJ15Q99712 375 aa19.44■□□□□ 0.7
TDP1-216ENST00000556867 ABHD6Q9BV23 337 aa19.44■□□□□ 0.7
TDP1-216ENST00000556867 ZNF275Q9NSD4 429 aaPredicted RBP19.44■□□□□ 0.7
TDP1-216ENST00000556867 CENPMQ9NSP4 180 aa19.44■□□□□ 0.7
TDP1-216ENST00000556867 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.43■□□□□ 0.7
TDP1-216ENST00000556867 TANC2Q9HCD6 1990 aa19.43■□□□□ 0.7
TDP1-216ENST00000556867 TPD52L2O43399 206 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms