RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 ZNF454Q8N9F8 522 aa15□□□□□ -0.01
SHMT2-225ENST00000556798 SYNPRQ8TBG9 265 aa15□□□□□ -0.01
SHMT2-225ENST00000556798 RNF133Q8WVZ7 376 aa15□□□□□ -0.01
SHMT2-225ENST00000556798 IPCEF1Q8WWN9 437 aaPredicted RBP15□□□□□ -0.01
SHMT2-225ENST00000556798 SPTSSAQ969W0 71 aa15□□□□□ -0.01
SHMT2-225ENST00000556798 MARS2Q96GW9 593 aaKnown RBP15□□□□□ -0.01
SHMT2-225ENST00000556798 DOK1Q99704 481 aa15□□□□□ -0.01
SHMT2-225ENST00000556798 FOXC2Q99958 501 aa15□□□□□ -0.01
SHMT2-225ENST00000556798 GSX2Q9BZM3 304 aa15□□□□□ -0.01
SHMT2-225ENST00000556798 YIPF3Q9GZM5 350 aa15□□□□□ -0.01
SHMT2-225ENST00000556798 DYNLRB1Q9NP97 96 aa15□□□□□ -0.01
SHMT2-225ENST00000556798 WARS2Q9UGM6 360 aaKnown RBP15□□□□□ -0.01
SHMT2-225ENST00000556798 LAMP5Q9UJQ1 280 aa15□□□□□ -0.01
SHMT2-225ENST00000556798 MAP1AP78559 2803 aaPredicted RBP15□□□□□ -0.01
SHMT2-225ENST00000556798 PRR32B1ATL7 298 aa14.99□□□□□ -0.01
SHMT2-225ENST00000556798 LCATP04180 440 aa14.99□□□□□ -0.01
SHMT2-225ENST00000556798 SLC2A1P11166 492 aa14.99□□□□□ -0.01
SHMT2-225ENST00000556798 ALOX5APP20292 161 aa14.99□□□□□ -0.01
SHMT2-225ENST00000556798 HSD11B1P28845 292 aa14.99□□□□□ -0.01
SHMT2-225ENST00000556798 GCH1P30793 250 aa14.99□□□□□ -0.01
SHMT2-225ENST00000556798 OPRL1P41146 370 aa14.99□□□□□ -0.01
SHMT2-225ENST00000556798 RGS6P49758 472 aa14.99□□□□□ -0.01
SHMT2-225ENST00000556798 TPTEP56180 551 aa14.99□□□□□ -0.01
SHMT2-225ENST00000556798 KLF3P57682 345 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-225ENST00000556798 ZNF718Q3SXZ3 478 aa14.99□□□□□ -0.01
SHMT2-225ENST00000556798 LRRN1Q6UXK5 716 aa14.99□□□□□ -0.01
SHMT2-225ENST00000556798 ZCCHC24Q8N2G6 241 aaKnown RBP14.99□□□□□ -0.01
SHMT2-225ENST00000556798 KLF14Q8TD94 323 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-225ENST00000556798 RFKQ969G6 155 aa14.99□□□□□ -0.01
SHMT2-225ENST00000556798 APOBEC3DQ96AK3 386 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-225ENST00000556798 KCNJ15Q99712 375 aa14.99□□□□□ -0.01
SHMT2-225ENST00000556798 VRK1Q99986 396 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-225ENST00000556798 ADI1Q9BV57 179 aa14.99□□□□□ -0.01
SHMT2-225ENST00000556798 VCXQ9H320 206 aa14.99□□□□□ -0.01
SHMT2-225ENST00000556798 HAO2Q9NYQ3 351 aa14.99□□□□□ -0.01
SHMT2-225ENST00000556798 PTTG3PQ9NZH4 202 aa14.99□□□□□ -0.01
SHMT2-225ENST00000556798 N6AMT1Q9Y5N5 214 aa14.99□□□□□ -0.01
SHMT2-225ENST00000556798 PMF1-BGLAPU3KQ54 211 aa14.99□□□□□ -0.01
SHMT2-225ENST00000556798 IGLV3-9A0A075B6K5 115 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 C5orf63A6NC05 138 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 H7C417 338 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 PSMD9O00233 223 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 ATP6V1G2O95670 118 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 IGHV4-39P01824 125 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 ADRA2AP08913 450 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 H2BFMP0C1H6 154 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 SBK2P0C263 348 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 BMP4P12644 408 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 PAX1P15863 534 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 OTX1P32242 354 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-225ENST00000556798 CX3CR1P49238 355 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 NUDT6P53370 316 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 PRSS12P56730 875 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 GRB2P62993 217 aaKnown RBP14.98□□□□□ -0.01
SHMT2-225ENST00000556798 HLXQ14774 488 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-225ENST00000556798 OCLNQ16625 522 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 SNAI3Q3KNW1 292 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 ZNF691Q5VV52 312 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 MBNL2Q5VZF2 373 aaKnown RBP14.98□□□□□ -0.01
SHMT2-225ENST00000556798 KRTAP1-3Q8IUG1 177 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 LRRC75A-AS1Q8N1F1 130 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 DHRSXQ8N5I4 330 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 ZNF283Q8N7M2 679 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 APH1BQ8WW43 257 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 GTF3AQ92664 365 aaKnown RBP14.98□□□□□ -0.01
SHMT2-225ENST00000556798 TRMT61AQ96FX7 289 aaKnown RBP14.98□□□□□ -0.01
SHMT2-225ENST00000556798 SORCS2Q96PQ0 1159 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 TBX5Q99593 518 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 APOL4Q9BPW4 351 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 C1QTNF5Q9BXJ0 243 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 TPK1Q9H3S4 243 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 TAAR3PQ9P1P4 343 aa14.98□□□□□ -0.01
SHMT2-225ENST00000556798 M0R233 179 aa14.97□□□□□ -0.01
SHMT2-225ENST00000556798 LY6HO94772 140 aa14.97□□□□□ -0.01
SHMT2-225ENST00000556798 NAT2P11245 290 aa14.97□□□□□ -0.01
SHMT2-225ENST00000556798 SLC15A1P46059 708 aa14.97□□□□□ -0.01
SHMT2-225ENST00000556798 EVX1P49640 407 aa14.97□□□□□ -0.01
SHMT2-225ENST00000556798 PPOXP50336 477 aa14.97□□□□□ -0.01
SHMT2-225ENST00000556798 SELENOVP59797 346 aa14.97□□□□□ -0.01
SHMT2-225ENST00000556798 ADARB1P78563 741 aaKnown RBP14.97□□□□□ -0.01
SHMT2-225ENST00000556798 IL5RAQ01344 420 aa14.97□□□□□ -0.01
SHMT2-225ENST00000556798 NKPD1Q17RQ9 610 aa14.97□□□□□ -0.01
SHMT2-225ENST00000556798 Q5PR19 223 aa14.97□□□□□ -0.01
SHMT2-225ENST00000556798 SLC25A30Q5SVS4 291 aa14.97□□□□□ -0.01
SHMT2-225ENST00000556798 MEDAGQ5VYS4 303 aa14.97□□□□□ -0.01
SHMT2-225ENST00000556798 TTC23Q5W5X9 447 aa14.97□□□□□ -0.01
SHMT2-225ENST00000556798 DRAM2Q6UX65 266 aa14.97□□□□□ -0.01
SHMT2-225ENST00000556798 COLCA1Q6ZS62 124 aa14.97□□□□□ -0.01
SHMT2-225ENST00000556798 C1orf174Q8IYL3 243 aa14.97□□□□□ -0.01
SHMT2-225ENST00000556798 RHOXF1Q8NHV9 184 aa14.97□□□□□ -0.01
SHMT2-225ENST00000556798 RNFT2Q96EX2 444 aa14.97□□□□□ -0.01
SHMT2-225ENST00000556798 CXXC4Q9H2H0 198 aa14.97□□□□□ -0.01
SHMT2-225ENST00000556798 SLCO1C1Q9NYB5 712 aa14.97□□□□□ -0.01
SHMT2-225ENST00000556798 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.97□□□□□ -0.01
SHMT2-225ENST00000556798 RRP15Q9Y3B9 282 aaKnown RBP14.97□□□□□ -0.01
SHMT2-225ENST00000556798 LRP12Q9Y561 859 aa14.97□□□□□ -0.01
SHMT2-225ENST00000556798 ZNF670-ZNF695F2Z2N8 137 aa14.96□□□□□ -0.01
SHMT2-225ENST00000556798 J3QW42 95 aa14.96□□□□□ -0.01
SHMT2-225ENST00000556798 MAGEB4O15481 346 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-225ENST00000556798 MPZL2O60487 215 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms