RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, human

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHMT2-223	ENST00000556689	ERICH4	A6NGS2	130 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	SLC22A31	A6NKX4	558 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689		H0YL77	283 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689		J3QW42	95 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	P2RY10	O00398	339 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	PHYH	O14832	338 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	GYG2	O15488	501 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	ENSA	O43768	121 aa	Known RBP	10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	LIPF	P07098	398 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	IFI30	P13284	250 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	IRF2	P14316	349 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	PMEL	P40967	661 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	OR1E2	P47887	323 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	GZMM	P51124	257 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	FAM201A	Q5SY85	155 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	CD276	Q5ZPR3	534 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	RUSC1-AS1	Q66K80	236 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	LYPD2	Q6UXB3	125 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	FBXW12	Q6X9E4	464 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	ZNF841	Q6ZN19	808 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	DCDC5	Q6ZRR9	648 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	OR51A7	Q8NH64	312 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	GATAD2B	Q8WXI9	593 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	SLC7A6	Q92536	515 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	RASD2	Q96D21	266 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	TCF7L1	Q9HCS4	588 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	TMEM100	Q9NV29	134 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	ARL8B	Q9NVJ2	186 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	PTTG3P	Q9NZH4	202 aa		10.53	□□□□□ -0.72
SHMT2-223	ENST00000556689	CENPVL3	A0A0U1RRI6	287 aa		10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	FBP2	O00757	339 aa		10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	PIP5K1C	O60331	668 aa		10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	TOX4	O94842	621 aa		10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	IFNA14	P01570	189 aa		10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	CFHR2	P36980	270 aa		10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	RGS6	P49758	472 aa		10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	NPY4R	P50391	375 aa		10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	PROK1	P58294	105 aa		10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	ST3GAL3	Q11203	375 aa		10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	AQP6	Q13520	282 aa		10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	ANKDD1A	Q495B1	522 aa		10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	HIST2H2BD	Q6DRA6	164 aa		10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	HACD2	Q6Y1H2	254 aa		10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	OAF	Q86UD1	273 aa		10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	MICU2	Q8IYU8	434 aa		10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	OR1F12	Q8NHA8	337 aa		10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	FAM110D	Q8TAY7	271 aa	Predicted RBP	10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	HOPX	Q9BPY8	73 aa	Predicted RBP	10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	TRIM15	Q9C019	465 aa		10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	SPAG4	Q9NPE6	437 aa		10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	ACOXL	Q9NUZ1	547 aa		10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	GRHPR	Q9UBQ7	328 aa		10.52	□□□□□ -0.73
SHMT2-223	ENST00000556689	NOTCH1	P46531	2555 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	TRAV27	A0A087WT01	109 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	OR6C6	A6NF89	314 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	IQCF6	A8MYZ5	107 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689		B2RBV5	119 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	ZNF879	B4DU55	563 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	C22orf46	C9J442	243 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689		F5H5P2	479 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689		H7C1C5	153 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	XKRY	O14609	159 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	MLNR	O43193	412 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	AHCYL1	O43865	530 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	GPR137B	O60478	399 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	TSPAN15	O95858	294 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	SFTPB	P07988	381 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	DBH	P09172	617 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	IFNA8	P32881	189 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	LSM6	P62312	80 aa	Known RBP	10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	LCN6	P62502	163 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	BNIP1	Q12981	228 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	CCDC92	Q53HC0	331 aa	Predicted RBP	10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	PGAM4	Q8N0Y7	254 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	BHLHE23	Q8NDY6	225 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	ERGIC1	Q969X5	290 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	TECTB	Q96PL2	329 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	RAB3IP	Q96QF0	476 aa	Predicted RBP	10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	C1orf21	Q9H246	121 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	ERVK-18	Q9QC07	812 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	WNK1	Q9H4A3	2382 aa		10.51	□□□□□ -0.73
SHMT2-223	ENST00000556689	TEX13C	A0A0J9YWL9	993 aa		10.5	□□□□□ -0.73
SHMT2-223	ENST00000556689	PRSS37	A4D1T9	235 aa		10.5	□□□□□ -0.73
SHMT2-223	ENST00000556689	EFCAB9	A8MZ26	197 aa		10.5	□□□□□ -0.73
SHMT2-223	ENST00000556689	GMNN	O75496	209 aa		10.5	□□□□□ -0.73
SHMT2-223	ENST00000556689	ALX3	O95076	343 aa		10.5	□□□□□ -0.73
SHMT2-223	ENST00000556689	HLA-DPB1	P04440	258 aa		10.5	□□□□□ -0.73
SHMT2-223	ENST00000556689	MMP9	P14780	707 aa		10.5	□□□□□ -0.73
SHMT2-223	ENST00000556689	FPR3	P25089	353 aa		10.5	□□□□□ -0.73
SHMT2-223	ENST00000556689	RPL4	P36578	427 aa	Known RBP	10.5	□□□□□ -0.73
SHMT2-223	ENST00000556689	PSMB10	P40306	273 aa		10.5	□□□□□ -0.73
SHMT2-223	ENST00000556689	GATA4	P43694	442 aa		10.5	□□□□□ -0.73
SHMT2-223	ENST00000556689	FHL1	Q13642	323 aa		10.5	□□□□□ -0.73
SHMT2-223	ENST00000556689	KCNJ8	Q15842	424 aa		10.5	□□□□□ -0.73
SHMT2-223	ENST00000556689	NANOGP8	Q6NSW7	305 aa		10.5	□□□□□ -0.73
SHMT2-223	ENST00000556689	CELF2-AS1	Q8N7Q2	184 aa		10.5	□□□□□ -0.73
SHMT2-223	ENST00000556689	PNLDC1	Q8NA58	520 aa	Known RBP	10.5	□□□□□ -0.73
SHMT2-223	ENST00000556689	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	10.5	□□□□□ -0.73
SHMT2-223	ENST00000556689	C19orf18	Q8NEA5	215 aa		10.5	□□□□□ -0.73
SHMT2-223	ENST00000556689	OR8J3	Q8NGG0	315 aa		10.5	□□□□□ -0.73

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