RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 OR1F12Q8NHA8 337 aa11.49□□□□□ -0.57
ACTN1-219ENST00000556432 ITPKCQ96DU7 683 aa11.49□□□□□ -0.57
ACTN1-219ENST00000556432 CPPED1Q9BRF8 314 aaPredicted RBP11.49□□□□□ -0.57
ACTN1-219ENST00000556432 WACQ9BTA9 647 aa11.49□□□□□ -0.57
ACTN1-219ENST00000556432 TMEM109Q9BVC6 243 aa11.49□□□□□ -0.57
ACTN1-219ENST00000556432 SMURF1Q9HCE7 757 aa11.49□□□□□ -0.57
ACTN1-219ENST00000556432 ONECUT1Q9UBC0 465 aa11.49□□□□□ -0.57
ACTN1-219ENST00000556432 FOXJ3Q9UPW0 622 aa11.49□□□□□ -0.57
ACTN1-219ENST00000556432 SIGLEC9Q9Y336 463 aa11.49□□□□□ -0.57
ACTN1-219ENST00000556432 TRBV5-3A0A0A0MS03 114 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 A0A1W2PRD5 423 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 A0A1W2PRF3 423 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 A0A1W2PRM7 423 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 IQCF6A8MYZ5 107 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 J3QW42 95 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 OR10H3O60404 316 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 MPIG6BO95866 241 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 GATA4P43694 442 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 PRSS12P56730 875 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 AQP6Q13520 282 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 NSUN5P1Q3KNT7 163 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 OTPQ5XKR4 325 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 C11orf87Q6NUJ2 197 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 C1orf122Q6ZSJ8 110 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 BTN2A1Q7KYR7 527 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 LYG1Q8N1E2 194 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 OR4S1Q8NGB4 309 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 Q8TCH9 128 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 ST8SIA4Q92187 359 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 APOBEC3DQ96AK3 386 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-219ENST00000556432 TAMM41Q96BW9 452 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 ECSITQ9BQ95 431 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 HCAR1Q9BXC0 346 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 RERGLQ9H628 205 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 ZNRD1Q9P1U0 126 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 POLR1DQ9Y2S0 133 aa11.48□□□□□ -0.57
ACTN1-219ENST00000556432 A0A1B0GVI7 797 aa11.47□□□□□ -0.57
ACTN1-219ENST00000556432 OR6C6A6NF89 314 aa11.47□□□□□ -0.57
ACTN1-219ENST00000556432 LGALS8O00214 317 aa11.47□□□□□ -0.57
ACTN1-219ENST00000556432 SHOX2O60902 331 aaPredicted RBP11.47□□□□□ -0.57
ACTN1-219ENST00000556432 TSPAN19P0C672 248 aa11.47□□□□□ -0.57
ACTN1-219ENST00000556432 EEF1B2P24534 225 aaKnown RBP11.47□□□□□ -0.57
ACTN1-219ENST00000556432 MPPED2Q15777 294 aa11.47□□□□□ -0.57
ACTN1-219ENST00000556432 CLEC12AQ5QGZ9 265 aa11.47□□□□□ -0.57
ACTN1-219ENST00000556432 BEND6Q5SZJ8 279 aaPredicted RBP11.47□□□□□ -0.57
ACTN1-219ENST00000556432 FUNDC1Q8IVP5 155 aa11.47□□□□□ -0.57
ACTN1-219ENST00000556432 MICU2Q8IYU8 434 aa11.47□□□□□ -0.57
ACTN1-219ENST00000556432 KLHDC1Q8N7A1 406 aa11.47□□□□□ -0.57
ACTN1-219ENST00000556432 SPERTQ8NA61 448 aa11.47□□□□□ -0.57
ACTN1-219ENST00000556432 OR5R1Q8NH85 324 aa11.47□□□□□ -0.57
ACTN1-219ENST00000556432 AENQ8WTP8 325 aaKnown RBP11.47□□□□□ -0.57
ACTN1-219ENST00000556432 LIPHQ8WWY8 451 aa11.47□□□□□ -0.57
ACTN1-219ENST00000556432 ERGIC1Q969X5 290 aa11.47□□□□□ -0.57
ACTN1-219ENST00000556432 PHF21AQ96BD5 680 aa11.47□□□□□ -0.57
ACTN1-219ENST00000556432 FN3KRPQ9HA64 309 aa11.47□□□□□ -0.57
ACTN1-219ENST00000556432 RNF7Q9UBF6 113 aa11.47□□□□□ -0.57
ACTN1-219ENST00000556432 DNAJB11Q9UBS4 358 aa11.47□□□□□ -0.57
ACTN1-219ENST00000556432 FBLN5Q9UBX5 448 aa11.47□□□□□ -0.57
ACTN1-219ENST00000556432 RIMS3Q9UJD0 308 aa11.47□□□□□ -0.57
ACTN1-219ENST00000556432 HIF3AQ9Y2N7 669 aa11.47□□□□□ -0.57
ACTN1-219ENST00000556432 SH3GLB1Q9Y371 365 aa11.47□□□□□ -0.57
ACTN1-219ENST00000556432 GMEB1Q9Y692 573 aa11.47□□□□□ -0.57
ACTN1-219ENST00000556432 TRAV27A0A087WT01 109 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 TRAV38-1A0A0B4J264 116 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 RNASEK-C17orf49H0YIS7 233 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 XKRYO14609 159 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 POLR3GO15318 223 aaPredicted RBP11.46□□□□□ -0.57
ACTN1-219ENST00000556432 OR5F1O95221 314 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 IGF2P01344 180 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 GYPAP02724 150 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 VSIG10L2P0DP72 767 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 IFI30P13284 250 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 TNFRSF1BP20333 461 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 RAD23AP54725 363 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 MTPNP58546 118 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 PRB3Q04118 309 aaPredicted RBP11.46□□□□□ -0.57
ACTN1-219ENST00000556432 MAB21L1Q13394 359 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 PIN1Q13526 163 aaPredicted RBP11.46□□□□□ -0.57
ACTN1-219ENST00000556432 CDONQ4KMG0 1287 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 AGKQ53H12 422 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.46□□□□□ -0.57
ACTN1-219ENST00000556432 CELF2-AS1Q8N7Q2 184 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 OR4C13Q8NGP0 309 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 OR51A7Q8NH64 312 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 BPIFA2Q96DR5 249 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 ZNF583Q96ND8 569 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 CNTD2Q9H8S5 307 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 TRIM36Q9NQ86 728 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 SIRT7Q9NRC8 400 aa11.46□□□□□ -0.57
ACTN1-219ENST00000556432 DVL1O14640 695 aa11.45□□□□□ -0.58
ACTN1-219ENST00000556432 RER1O15258 196 aa11.45□□□□□ -0.58
ACTN1-219ENST00000556432 ECDO95905 644 aaPredicted RBP11.45□□□□□ -0.58
ACTN1-219ENST00000556432 RPL4P36578 427 aaKnown RBP11.45□□□□□ -0.58
ACTN1-219ENST00000556432 CD200P41217 278 aa11.45□□□□□ -0.58
ACTN1-219ENST00000556432 GUCA2AQ02747 115 aa11.45□□□□□ -0.58
ACTN1-219ENST00000556432 OR8G1Q15617 311 aa11.45□□□□□ -0.58
ACTN1-219ENST00000556432 C11orf88Q6PI97 169 aa11.45□□□□□ -0.58
ACTN1-219ENST00000556432 DHDDSQ86SQ9 333 aa11.45□□□□□ -0.58
ACTN1-219ENST00000556432 CMTM4Q8IZR5 234 aa11.45□□□□□ -0.58
ACTN1-219ENST00000556432 OR2T6Q8NHC8 308 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms