RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 GGT2P36268 569 aa10.65□□□□□ -0.7
SNX6-207ENST00000556303 SRP9P49458 86 aaKnown RBP10.65□□□□□ -0.7
SNX6-207ENST00000556303 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.65□□□□□ -0.7
SNX6-207ENST00000556303 ZNF181Q2M3W8 571 aa10.65□□□□□ -0.7
SNX6-207ENST00000556303 RSPO1Q2MKA7 263 aaPredicted RBP10.65□□□□□ -0.7
SNX6-207ENST00000556303 ZNF770Q6IQ21 691 aaPredicted RBP10.65□□□□□ -0.7
SNX6-207ENST00000556303 CYP2R1Q6VVX0 501 aa10.65□□□□□ -0.7
SNX6-207ENST00000556303 Q6ZR03 302 aa10.65□□□□□ -0.7
SNX6-207ENST00000556303 LNX2Q8N448 690 aa10.65□□□□□ -0.7
SNX6-207ENST00000556303 KLHL36Q8N4N3 616 aa10.65□□□□□ -0.7
SNX6-207ENST00000556303 OR52E2Q8NGJ4 325 aa10.65□□□□□ -0.7
SNX6-207ENST00000556303 OR4C15Q8NGM1 316 aa10.65□□□□□ -0.7
SNX6-207ENST00000556303 OR2T4Q8NH00 348 aa10.65□□□□□ -0.7
SNX6-207ENST00000556303 ST7LQ8TDW4 575 aa10.65□□□□□ -0.7
SNX6-207ENST00000556303 PITX2Q99697 317 aa10.65□□□□□ -0.7
SNX6-207ENST00000556303 ATF6BQ99941 703 aa10.65□□□□□ -0.7
SNX6-207ENST00000556303 BTBD10Q9BSF8 475 aa10.65□□□□□ -0.7
SNX6-207ENST00000556303 C19orf24Q9BVV8 132 aa10.65□□□□□ -0.7
SNX6-207ENST00000556303 REPIN1Q9BWE0 567 aaKnown RBP10.65□□□□□ -0.7
SNX6-207ENST00000556303 HCAR1Q9BXC0 346 aa10.65□□□□□ -0.7
SNX6-207ENST00000556303 DGCR6LQ9BY27 220 aa10.65□□□□□ -0.7
SNX6-207ENST00000556303 PPP1R3CQ9UQK1 317 aa10.65□□□□□ -0.7
SNX6-207ENST00000556303 NOP16Q9Y3C1 178 aaKnown RBP10.65□□□□□ -0.7
SNX6-207ENST00000556303 TCRBV5S2A0A599 114 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 ISPDA4D126 451 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 GASTP01350 101 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 HLA-DQA2P01906 255 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 ACSM4P0C7M7 580 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 ZNF823P16415 610 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 ATP6V1B2P21281 511 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 BLVRAP53004 296 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 TPTEP56180 551 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 BTG1P62324 171 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 TRAP1Q12931 704 aaKnown RBP10.64□□□□□ -0.71
SNX6-207ENST00000556303 MALLQ13021 153 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 MEP1BQ16820 701 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 MICAQ29983 383 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 DCAF12L2Q5VW00 463 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 CD300LDQ6UXZ3 194 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 MUC20Q8N307 709 aaPredicted RBP10.64□□□□□ -0.71
SNX6-207ENST00000556303 CELF2-AS1Q8N7Q2 184 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 ATG16L2Q8NAA4 619 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 CCDC197Q8NCU1 140 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 SDR9C7Q8NEX9 313 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 NANPQ8TBE9 248 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 ZNF418Q8TF45 676 aaPredicted RBP10.64□□□□□ -0.71
SNX6-207ENST00000556303 ERGIC1Q969X5 290 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 ASB9Q96DX5 294 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 OR2V2Q96R30 315 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 SLC30A2Q9BRI3 323 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 SLC22A4Q9H015 551 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 METTL17Q9H7H0 456 aaPredicted RBP10.64□□□□□ -0.71
SNX6-207ENST00000556303 REEP1Q9H902 201 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 PATZ1Q9HBE1 687 aaKnown RBP10.64□□□□□ -0.71
SNX6-207ENST00000556303 GCM1Q9NP62 436 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 TMEM100Q9NV29 134 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 PTTG3PQ9NZH4 202 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 PCDHB10Q9UN67 800 aa10.64□□□□□ -0.71
SNX6-207ENST00000556303 DOCK11Q5JSL3 2073 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 TMEM178BH3BS89 294 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 GPANK1O95872 356 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 SBK2P0C263 348 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 RAP2AP10114 183 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 MDH2P40926 338 aaKnown RBP10.63□□□□□ -0.71
SNX6-207ENST00000556303 GATA4P43694 442 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 SLC25A1P53007 311 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 HLXQ14774 488 aaPredicted RBP10.63□□□□□ -0.71
SNX6-207ENST00000556303 PCK2Q16822 640 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 TEX30Q5JUR7 227 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 CLEC12AQ5QGZ9 265 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 ZNF362Q5T0B9 420 aaPredicted RBP10.63□□□□□ -0.71
SNX6-207ENST00000556303 SLC35F1Q5T1Q4 408 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 OR2T5Q6IEZ7 315 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 OR2T2Q6IF00 324 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 CORO6Q6QEF8 472 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 CFAP77Q6ZQR2 320 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 C1QL2Q7Z5L3 287 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 C1orf87Q8N0U7 546 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 OR2T33Q8NG76 320 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 OR9Q2Q8NGE9 314 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 OR2T29Q8NH02 315 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 ITLN1Q8WWA0 313 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 SPTSSAQ969W0 71 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 SIGLEC11Q96RL6 698 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 JMJD8Q96S16 334 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 TMPRSS13Q9BYE2 586 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 EGLN3Q9H6Z9 239 aa10.63□□□□□ -0.71
SNX6-207ENST00000556303 PNRC2Q9NPJ4 139 aaKnown RBP10.63□□□□□ -0.71
SNX6-207ENST00000556303 DDX28Q9NUL7 540 aaKnown RBP10.63□□□□□ -0.71
SNX6-207ENST00000556303 MRPL22Q9NWU5 206 aaKnown RBP10.63□□□□□ -0.71
SNX6-207ENST00000556303 ARRDC5A6NEK1 342 aa10.62□□□□□ -0.71
SNX6-207ENST00000556303 LRRC30A6NM36 301 aa10.62□□□□□ -0.71
SNX6-207ENST00000556303 A8MXK9 166 aa10.62□□□□□ -0.71
SNX6-207ENST00000556303 F5H5K5 113 aa10.62□□□□□ -0.71
SNX6-207ENST00000556303 IFNGP01579 166 aa10.62□□□□□ -0.71
SNX6-207ENST00000556303 T-ENOLP0DO92 83 aa10.62□□□□□ -0.71
SNX6-207ENST00000556303 FMO3P31513 532 aa10.62□□□□□ -0.71
SNX6-207ENST00000556303 OTX1P32242 354 aaPredicted RBP10.62□□□□□ -0.71
SNX6-207ENST00000556303 MS4A2Q01362 244 aa10.62□□□□□ -0.71
SNX6-207ENST00000556303 SPRNQ5BIV9 151 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms