RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 CCNKO75909 580 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 VAMP5O95183 116 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 HBE1P02100 147 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 APCSP02743 223 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 ANXA8P13928 327 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 RAB4AP20338 218 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 DTYMKP23919 212 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 NBL1P41271 181 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 GFERP55789 205 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 VSX2P58304 361 aaPredicted RBP1.59□□□□□ -2.15
SCFD1-218ENST00000556256 ZNF121P58317 390 aaPredicted RBP1.59□□□□□ -2.15
SCFD1-218ENST00000556256 ANXA8L1Q5VT79 327 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 STUMQ69YW2 141 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 EIF3MQ7L2H7 374 aaKnown RBP1.59□□□□□ -2.15
SCFD1-218ENST00000556256 COX18Q8N8Q8 333 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 C8orf31Q8N9H6 132 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 OR4K5Q8NGD3 323 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 OR52E5Q8NH55 327 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 COQ8AQ8NI60 647 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 CIRBP-AS1Q8TBR5 109 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 APH1BQ8WW43 257 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 RGP1Q92546 391 aaPredicted RBP1.59□□□□□ -2.15
SCFD1-218ENST00000556256 DCPSQ96C86 337 aaKnown RBP1.59□□□□□ -2.15
SCFD1-218ENST00000556256 FLYWCH2Q96CP2 140 aaKnown RBP1.59□□□□□ -2.15
SCFD1-218ENST00000556256 ECHDC3Q96DC8 303 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 NRBF2Q96F24 287 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 RNF145Q96MT1 663 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 GSDMAQ96QA5 445 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 MTG1Q9BT17 334 aaPredicted RBP1.59□□□□□ -2.15
SCFD1-218ENST00000556256 TEKT3Q9BXF9 490 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 SLC7A5P2Q9GIP4 190 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 OR52D1Q9H346 318 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 ELOVL6Q9H5J4 265 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 LYRM4Q9HD34 91 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 ZDHHC4Q9NPG8 344 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 GGA2Q9UJY4 613 aa1.59□□□□□ -2.15
SCFD1-218ENST00000556256 FHOD3Q2V2M9 1422 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 PLA2R1Q13018 1463 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 TRAV25A0A0B4J276 109 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 A0A0J9YXV3 536 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 OR6C74A6NCV1 312 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 PDZK1P1A8MUH7 402 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 H0YJW9 148 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 TEX46H3BTG2 121 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 H7C0C1 242 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 H7C1H1 209 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 WRBO00258 174 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 SLC9A3R1O14745 358 aaPredicted RBP1.58□□□□□ -2.16
SCFD1-218ENST00000556256 NVLO15381 856 aaKnown RBP1.58□□□□□ -2.16
SCFD1-218ENST00000556256 ERI3O43414 337 aaKnown RBP1.58□□□□□ -2.16
SCFD1-218ENST00000556256 DNAJB6O75190 326 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 RDH16O75452 317 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 REM1O75628 298 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 FCN3O75636 299 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 SEMA3DO95025 777 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 CCNB2O95067 398 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 MPZL1O95297 269 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 FGFR1OPO95684 399 aaKnown RBP1.58□□□□□ -2.16
SCFD1-218ENST00000556256 LSM8O95777 96 aaKnown RBP1.58□□□□□ -2.16
SCFD1-218ENST00000556256 HPRT1P00492 218 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 HLA-HP01893 362 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 CD74P04233 296 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 TPM2P07951 284 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 CLTAP09496 248 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 TACSTD2P09758 323 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 OR8U9P0C7N5 309 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 CSNK2A2P19784 350 aaPredicted RBP1.58□□□□□ -2.16
SCFD1-218ENST00000556256 EIF2S2P20042 333 aaKnown RBP1.58□□□□□ -2.16
SCFD1-218ENST00000556256 GSTM3P21266 225 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 KIR3DL2P43630 455 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 RPS5P46782 204 aaKnown RBP1.58□□□□□ -2.16
SCFD1-218ENST00000556256 ATP5OP48047 213 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 CXCL12P48061 93 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 KRTAP12-3P60328 96 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 IRF8Q02556 426 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 IFT88Q13099 833 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 IL18Q14116 193 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 NCF4Q15080 339 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 SMUG1Q53HV7 270 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 TPTE2P1Q5T6R2 138 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 SAXO2Q658L1 398 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 TWF2Q6IBS0 349 aaKnown RBP1.58□□□□□ -2.16
SCFD1-218ENST00000556256 CALHM1Q8IU99 346 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 APRG1Q8IVJ8 170 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 FAM71AQ8IYT1 594 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 ARRDC1Q8N5I2 433 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 JAGN1Q8N5M9 183 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 ZNF709Q8N972 641 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 OR11H7Q8NGC8 314 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 ZNF461Q8TAF7 563 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 LRRC29Q8WV35 223 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 ZNF317Q96PQ6 595 aaPredicted RBP1.58□□□□□ -2.16
SCFD1-218ENST00000556256 ZNF382Q96SR6 550 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 RNF5Q99942 180 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 RSPO3Q9BXY4 272 aaPredicted RBP1.58□□□□□ -2.16
SCFD1-218ENST00000556256 EDA2RQ9HAV5 297 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 BEX1Q9HBH7 125 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 AGPAT4Q9NRZ5 378 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 SLC17A7Q9P2U7 560 aa1.58□□□□□ -2.16
SCFD1-218ENST00000556256 TRMT112Q9UI30 125 aaKnown RBP1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms